RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 DTX3Q8N9I9 347 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 PSMF1Q92530 271 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 G6PC2Q9NQR9 355 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 FOXJ3Q9UPW0 622 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 EMC9Q9Y3B6 208 aa22.86■■□□□ 1.25
CPNE1-216ENST00000437340 EEF1E1O43324 174 aaKnown RBP22.85■■□□□ 1.25
CPNE1-216ENST00000437340 ACHEP22303 614 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 KCNMB1Q16558 191 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 CARTPTQ16568 116 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 RHOUQ7L0Q8 258 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 FCRLAQ7L513 359 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 UBE2J2Q8N2K1 259 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 KCNE4Q8WWG9 221 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 SLAMF6Q96DU3 332 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 OR5V1Q9UGF6 321 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 OR52A1Q9UKL2 312 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 FBXL3Q9UKT7 428 aa22.85■■□□□ 1.25
CPNE1-216ENST00000437340 MRPS18CQ9Y3D5 142 aaKnown RBP22.85■■□□□ 1.25
CPNE1-216ENST00000437340 A0A1W2PPL8 197 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 TFECO14948 347 aaPredicted RBP22.84■■□□□ 1.25
CPNE1-216ENST00000437340 LANCL1O43813 399 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 MAS1P04201 325 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 EIF2B2P49770 351 aaKnown RBP22.84■■□□□ 1.25
CPNE1-216ENST00000437340 NHLH1Q02575 133 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 TMPRSS12Q86WS5 348 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 ASB5Q8WWX0 329 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 SLC25A38Q96DW6 304 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 HHLA2Q9UM44 414 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 TMEM269A0A1B0GVZ9 245 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 TPPPO94811 219 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 TRAPPC2P0DI81 140 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 TRAPPC2BP0DI82 140 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 FSTP19883 344 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 AGFG1P52594 562 aaKnown RBP22.84■■□□□ 1.25
CPNE1-216ENST00000437340 B3GALT5-AS1P59052 145 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 LRFN4Q6PJG9 635 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 CORO6Q6QEF8 472 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 ZNF227Q86WZ6 799 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 BEST3Q8N1M1 668 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 YIPF5Q969M3 257 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 PPP1R14AQ96A00 147 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 B3GNT4Q9C0J1 378 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 CENPMQ9NSP4 180 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 STEAP1Q9UHE8 339 aa22.84■■□□□ 1.25
CPNE1-216ENST00000437340 DLL1O00548 723 aa22.83■■□□□ 1.24
CPNE1-216ENST00000437340 UBCP0CG48 685 aaKnown RBP22.83■■□□□ 1.24
CPNE1-216ENST00000437340 KLK2P20151 261 aa22.83■■□□□ 1.24
CPNE1-216ENST00000437340 TMEM244Q5VVB8 128 aa22.83■■□□□ 1.24
CPNE1-216ENST00000437340 CARD17Q5XLA6 110 aa22.83■■□□□ 1.24
CPNE1-216ENST00000437340 CREB3L2Q70SY1 520 aa22.83■■□□□ 1.24
CPNE1-216ENST00000437340 S100A16Q96FQ6 103 aaKnown RBP22.83■■□□□ 1.24
CPNE1-216ENST00000437340 THOC3Q96J01 351 aaKnown RBP22.83■■□□□ 1.24
CPNE1-216ENST00000437340 SULT1B1O43704 296 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 QDPRP09417 244 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 CLDN12P56749 244 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 CLDN17P56750 224 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 KLHL24Q6TFL4 600 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 ESPNLQ6ZVH7 1005 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 SMIM4Q8WVI0 70 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 HAVCR1Q96D42 359 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 ZFP3Q96NJ6 502 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 NIPAL2Q9H841 368 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 SEC61A2Q9H9S3 476 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 CKLFQ9UBR5 152 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 MRPS7Q9Y2R9 242 aaKnown RBP22.82■■□□□ 1.24
CPNE1-216ENST00000437340 CNOT1A5YKK6 2376 aaKnown RBP22.82■■□□□ 1.24
CPNE1-216ENST00000437340 PCSK5Q92824 1860 aa22.82■■□□□ 1.24
CPNE1-216ENST00000437340 A0A0G2JMM0 328 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 A0A0J9YW62 118 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 A0A1W2PPB8 328 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 A0A1W2PRS3 328 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 LRRC3CA6NJW4 275 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 KIR3DP1A8MWS1 328 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 RAD1O60671 282 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 SLC6A1P30531 599 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 MNDAP41218 407 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 ZNF133P52736 654 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-216ENST00000437340 ART1P52961 327 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 CLDN20P56880 219 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 GPR176Q14439 515 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 SLC36A2Q495M3 483 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 ASB18Q6ZVZ8 466 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 DNAAF1Q8NEP3 725 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 OR2AJ1Q8NGZ0 328 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 C15orf40Q8WUR7 153 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 STMN3Q9NZ72 180 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 GLTPQ9NZD2 209 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 GDF2Q9UK05 429 aaPredicted RBP22.81■■□□□ 1.24
CPNE1-216ENST00000437340 LHFPL6Q9Y693 200 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 TNFSF15O95150 251 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 CEACAM1P13688 526 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 NOVA1P51513 510 aaKnown RBP22.81■■□□□ 1.24
CPNE1-216ENST00000437340 MFAP5Q13361 173 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 TOMM20Q15388 145 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 BCL2L15Q5TBC7 163 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 SYNPRQ8TBG9 265 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 IP6K3Q96PC2 410 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 C7orf50Q9BRJ6 194 aaKnown RBP22.81■■□□□ 1.24
CPNE1-216ENST00000437340 MARVELD1Q9BSK0 173 aa22.81■■□□□ 1.24
CPNE1-216ENST00000437340 FAM206AQ9NX38 181 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms