RNA–Protein interactions for RNA: ENST00000436786.1

LINC01239-202, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 2 BASIC

Gene LINC01239, Length 2,347 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-202ENST00000436786 NPHS2Q9NP85 383 aa3.73□□□□□ -1.81
LINC01239-202ENST00000436786 CYSLTR2Q9NS75 346 aa3.73□□□□□ -1.81
LINC01239-202ENST00000436786 DDX28Q9NUL7 540 aaKnown RBP3.73□□□□□ -1.81
LINC01239-202ENST00000436786 EGFL7Q9UHF1 273 aa3.73□□□□□ -1.81
LINC01239-202ENST00000436786 RIMS3Q9UJD0 308 aa3.73□□□□□ -1.81
LINC01239-202ENST00000436786 ZDHHC8Q9ULC8 765 aa3.73□□□□□ -1.81
LINC01239-202ENST00000436786 SH3GLB1Q9Y371 365 aa3.73□□□□□ -1.81
LINC01239-202ENST00000436786 NDUFAF1Q9Y375 327 aa3.73□□□□□ -1.81
LINC01239-202ENST00000436786 NPTNQ9Y639 398 aa3.73□□□□□ -1.81
LINC01239-202ENST00000436786 PPIAL4EA0A075B759 164 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 PPIAL4CA0A0B4J2A2 164 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 DNAJC9-AS1A6NH13 148 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 PPIAL4DF5H284 164 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 PIP5K1CO60331 668 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ICMTO60725 284 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 FOXH1O75593 365 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 SCG5P05408 212 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 CD55P08174 381 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ADH4P08319 380 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 CST2P09228 141 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 PPIAL4FP0DN26 164 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 LIPAP38571 399 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 RBM34P42696 430 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 OR1E2P47887 323 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 TAS2R41P59536 307 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 SEC61A1P61619 476 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 TNFAIP6P98066 277 aaPredicted RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 SLC3A1Q07837 685 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 CD47Q08722 323 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 FOXL1Q12952 345 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 PSG7Q13046 419 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ZNF154Q13106 437 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 BAMBIQ13145 260 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 CDK5R2Q13319 367 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 TOP3AQ13472 1001 aaPredicted RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 BEND6Q5SZJ8 279 aaPredicted RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 INTS11Q5TA45 600 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 RBMS3Q6XE24 437 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 LIPHQ8WWY8 451 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 TAF15Q92804 592 aaKnown RBP eCLIP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 C4orf45Q96LM5 186 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 C1orf147Q96MC9 270 aaPredicted RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 MRPL18Q9H0U6 180 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 POFUT1Q9H488 388 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ZNF696Q9H7X3 374 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 TMEM106BQ9NUM4 274 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ETAA1Q9NY74 926 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 PURGQ9UJV8 347 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 NUP50Q9UKX7 468 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 TIMM10BQ9Y5J6 103 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 SOX21Q9Y651 276 aaPredicted RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 AUP1Q9Y679 476 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 A0A1W2PPL8 197 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 FBP2O00757 339 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 TIMM8AO60220 97 aaPredicted RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 OR5F1O95221 314 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 IGHMP01871 453 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 VIMP08670 466 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ZNF12P17014 697 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 FUT4P22083 530 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 PRTN3P24158 256 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 SLC6A9P48067 706 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ARHGDIAP52565 204 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 RPL27P61353 136 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ENDOGQ14249 297 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ZMYND11Q15326 602 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ZMAT1Q5H9K5 638 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ARMCX4Q5H9R4 360 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 MTX3Q5HYI7 312 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 RABL3Q5HYI8 236 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 AGBL2Q5U5Z8 902 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 NANOGP8Q6NSW7 305 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 UNQ6126/PRO20091Q6UXV3 157 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 Q6ZR03 302 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 FOXL2NBQ6ZUU3 175 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 DOK3Q7L591 496 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 IGFN1Q86VF2 1251 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 LRRC28Q86X40 367 aaPredicted RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 CALHM3Q86XJ0 350 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 C1orf174Q8IYL3 243 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ALDH16A1Q8IZ83 802 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 KLHL36Q8N4N3 616 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 LRRC75AQ8NAA5 344 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 OR2Z1Q8NG97 314 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 RASSF5Q8WWW0 418 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 POP5Q969H6 163 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 CMBLQ96DG6 245 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ZNF48Q96MX3 618 aaPredicted RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 RBP7Q96R05 134 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 DIRC2Q96SL1 478 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 GPA33Q99795 319 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 ALG12Q9BV10 488 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 PATZ1Q9HBE1 687 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 EMC7Q9NPA0 242 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 CHCHD3Q9NX63 227 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 PLEK2Q9NYT0 353 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 STX18Q9P2W9 335 aaKnown RBP3.72□□□□□ -1.81
LINC01239-202ENST00000436786 BAG5Q9UL15 447 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 MED31Q9Y3C7 131 aa3.72□□□□□ -1.81
LINC01239-202ENST00000436786 INSIG2Q9Y5U4 225 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms