RNA–Protein interactions for RNA: ENST00000433257.5

DDX56-205, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-205ENST00000433257 SPACA7Q96KW9 195 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 TSNAXQ99598 290 aaKnown RBP13.3□□□□□ -0.28
DDX56-205ENST00000433257 MS4A7Q9GZW8 240 aaPredicted RBP13.3□□□□□ -0.28
DDX56-205ENST00000433257 SLC6A17Q9H1V8 727 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 CPNE7Q9UBL6 633 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 ATPIF1Q9UII2 106 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 RAB22AQ9UL26 194 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 HHLA2Q9UM44 414 aa13.3□□□□□ -0.28
DDX56-205ENST00000433257 CCDC163A0A0D9SF12 145 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 LOC390937A0A1W2PQ73 354 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 TVP23AA6NH52 213 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 FGF16O43320 207 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 SNAPINO95295 136 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 NSA2O95478 260 aaKnown RBP13.29□□□□□ -0.28
DDX56-205ENST00000433257 TNFP01375 233 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 IGHMP01871 453 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 ZNF735P0CB33 412 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 SP9P0CG40 484 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 SDHBP21912 280 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 CRABP1P29762 137 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 DNASE1L1P49184 302 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 CX3CR1P49238 355 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 LUMP51884 338 aaPredicted RBP13.29□□□□□ -0.28
DDX56-205ENST00000433257 EFNB2P52799 333 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 DCAF7P61962 342 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 SNRPNP63162 240 aaKnown RBP13.29□□□□□ -0.28
DDX56-205ENST00000433257 UBE2IP63279 158 aaKnown RBP13.29□□□□□ -0.28
DDX56-205ENST00000433257 NKAPLQ5M9Q1 402 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 TMEM244Q5VVB8 128 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 C3orf33Q6P1S2 294 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 DNM1P34Q6PK57 102 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 IL34Q6ZMJ4 242 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 DGAT2L6Q6ZPD8 337 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 TMED4Q7Z7H5 227 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 CATSPERDQ86XM0 798 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 TMEFF1Q8IYR6 380 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 FRMD1Q8N878 549 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 OR4C3Q8NH37 302 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 C16orf52Q8NHV5 167 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 ZNF563Q8TA94 476 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 RNF141Q8WVD5 230 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 SCGB3A2Q96PL1 93 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 ADAM19Q9H013 955 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 SLC39A1Q9NY26 324 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 VSX1Q9NZR4 365 aaPredicted RBP13.29□□□□□ -0.28
DDX56-205ENST00000433257 MLXQ9UH92 298 aa13.29□□□□□ -0.28
DDX56-205ENST00000433257 ZNF346Q9UL40 294 aaKnown RBP13.29□□□□□ -0.28
DDX56-205ENST00000433257 CARHSP1Q9Y2V2 147 aaKnown RBP13.29□□□□□ -0.28
DDX56-205ENST00000433257 TMEM218A2RU14 115 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 OR2AT4A6NND4 320 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 LDLRAD4O15165 306 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 GABRG2P18507 467 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 ZBTB25P24278 435 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 MST1P26927 711 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 AKT2P31751 481 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 PPICP45877 212 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 RPL27P61353 136 aaKnown RBP13.28□□□□□ -0.28
DDX56-205ENST00000433257 PMPCAQ10713 525 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 TAF13Q15543 124 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 TOMM34Q15785 309 aaPredicted RBP13.28□□□□□ -0.28
DDX56-205ENST00000433257 SGCBQ16585 318 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 MEP1BQ16820 701 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 PRTGQ2VWP7 1150 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 ACTBL2Q562R1 376 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 EIF5AL1Q6IS14 154 aaKnown RBP13.28□□□□□ -0.28
DDX56-205ENST00000433257 HAGHLQ6PII5 290 aaPredicted RBP13.28□□□□□ -0.28
DDX56-205ENST00000433257 ZNF813Q6ZN06 617 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 RD3Q7Z3Z2 195 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 GALNT16Q8N428 558 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 OR9A4Q8NGU2 314 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 PHOSPHO1Q8TCT1 267 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 METTL21AQ8WXB1 218 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 FAM46BQ96A09 425 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 MRGPRX1Q96LB2 322 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 SLC46A1Q96NT5 459 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 MOGAT1Q96PD6 335 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 BIN3Q9NQY0 253 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 MKL2Q9ULH7 1088 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 B9D1Q9UPM9 204 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 HS3ST3A1Q9Y663 406 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 CACNA1IQ9P0X4 2223 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 SCN2AQ99250 2005 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 A0A0B4J2A0 478 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 A0A1W2PQD3 144 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 POM121BA6NF01 834 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 F5H0A9 414 aaPredicted RBP13.28□□□□□ -0.28
DDX56-205ENST00000433257 ZNF217O75362 1048 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 PLATP00750 562 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 HLA-DQA2P01906 255 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 CXCR1P25024 350 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 CASRP41180 1078 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 FNTBP49356 437 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 INPP5JQ15735 1006 aaPredicted RBP13.28□□□□□ -0.28
DDX56-205ENST00000433257 MICBQ29980 383 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 C10orf91Q5T1B1 145 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 C17orf107Q6ZR85 190 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 ARHGEF39Q8N4T4 335 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 ZNF615Q8N8J6 731 aa13.28□□□□□ -0.28
DDX56-205ENST00000433257 RELL2Q8NC24 303 aaPredicted RBP13.28□□□□□ -0.28
DDX56-205ENST00000433257 OR1J2Q8NGS2 313 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms