RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 DUX5Q96PT3 197 aa12.54□□□□□ -0.4
PRKDC-203ENST00000432581 UNKLQ9H9P5 680 aaKnown RBP12.54□□□□□ -0.4
PRKDC-203ENST00000432581 TBCCD1Q9NVR7 557 aa12.54□□□□□ -0.4
PRKDC-203ENST00000432581 OR5V1Q9UGF6 321 aa12.54□□□□□ -0.4
PRKDC-203ENST00000432581 IL19Q9UHD0 177 aa12.54□□□□□ -0.4
PRKDC-203ENST00000432581 PPP1R3CQ9UQK1 317 aa12.54□□□□□ -0.4
PRKDC-203ENST00000432581 A0A1W2PPL8 197 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 F5H0A9 414 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-203ENST00000432581 SHOX2O60902 331 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-203ENST00000432581 KITLGP21583 273 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 CPT2P23786 658 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 IFNA8P32881 189 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 MDH2P40926 338 aaKnown RBP12.53□□□□□ -0.4
PRKDC-203ENST00000432581 MTNR1AP48039 350 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 CTXN1P60606 82 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 ST3GAL3Q11203 375 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 ENDOGQ14249 297 aaKnown RBP12.53□□□□□ -0.4
PRKDC-203ENST00000432581 NANOGP8Q6NSW7 305 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 ERICH5Q6P6B1 374 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 CALHM3Q86XJ0 350 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 MUC20Q8N307 709 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-203ENST00000432581 CLDN22Q8N7P3 220 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 OR8J3Q8NGG0 315 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 BPIFA2Q96DR5 249 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 C1orf147Q96MC9 270 aaPredicted RBP12.53□□□□□ -0.4
PRKDC-203ENST00000432581 ECSITQ9BQ95 431 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 C1QTNF5Q9BXJ0 243 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 POLE4Q9NR33 117 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 IL20RAQ9UHF4 553 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 LRCH1Q9Y2L9 728 aa12.53□□□□□ -0.4
PRKDC-203ENST00000432581 IFNL4K9M1U5 179 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 PPIAL4GP0DN37 164 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 IFI30P13284 250 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 OR1E2P47887 323 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 HTR5AP47898 357 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 SEC61A1P61619 476 aaKnown RBP12.52□□□□□ -0.41
PRKDC-203ENST00000432581 SCRN3Q0VDG4 424 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 ZMYND11Q15326 602 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 ANKDD1AQ495B1 522 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 RABL3Q5HYI8 236 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 TREML4Q6UXN2 200 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 BCL6BQ8N143 479 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-203ENST00000432581 THOC1Q96FV9 657 aaKnown RBP12.52□□□□□ -0.41
PRKDC-203ENST00000432581 ZNF48Q96MX3 618 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-203ENST00000432581 SIGLEC11Q96RL6 698 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 SIKE1Q9BRV8 207 aa12.52□□□□□ -0.41
PRKDC-203ENST00000432581 MS4A7Q9GZW8 240 aaPredicted RBP12.52□□□□□ -0.41
PRKDC-203ENST00000432581 ARHGAP32A7KAX9 2087 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 PIP5K1CO60331 668 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 DOK2O60496 412 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 PAX8Q06710 450 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 HNRNPA0Q13151 305 aaKnown RBP12.51□□□□□ -0.41
PRKDC-203ENST00000432581 METTL21CQ5VZV1 264 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 BTNL3Q6UXE8 466 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 Q6ZR03 302 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 C9orf139Q6ZV77 190 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 IGFN1Q86VF2 1251 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 LRRC75AQ8NAA5 344 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 OR52E2Q8NGJ4 325 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 ITLN1Q8WWA0 313 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 HAVCR1Q96D42 359 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 CMBLQ96DG6 245 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 ATP6V1G3Q96LB4 118 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 PRRC1Q96M27 445 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 SLITRK2Q9H156 845 aa12.51□□□□□ -0.41
PRKDC-203ENST00000432581 TRAV27A0A087WT01 109 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 CEACAM18A8MTB9 384 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 TMEM178BH3BS89 294 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 J3QW42 95 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 FBP2O00757 339 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 SGCEO43556 437 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 AHCYL1O43865 530 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 NPPAP01160 153 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 MMP16P51512 607 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 GUCY1A3Q02108 690 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 SLC9A3R2Q15599 337 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 PDLIM3Q53GG5 364 aaPredicted RBP12.5□□□□□ -0.41
PRKDC-203ENST00000432581 CYBRD1Q53TN4 286 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 COQ5Q5HYK3 327 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 SLC27A4Q6P1M0 643 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 LEG1Q6P5S2 330 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 LRRN1Q6UXK5 716 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 OAFQ86UD1 273 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 PARP8Q8N3A8 854 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 OR51A7Q8NH64 312 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 PTP4A1Q93096 173 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 MAGEB18Q96M61 343 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 OR2V2Q96R30 315 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 POFUT1Q9H488 388 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 MRGBPQ9NV56 204 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 INTS9Q9NV88 658 aaKnown RBP12.5□□□□□ -0.41
PRKDC-203ENST00000432581 A4GNTQ9UNA3 340 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 TANC2Q9HCD6 1990 aa12.5□□□□□ -0.41
PRKDC-203ENST00000432581 FXYD1O00168 92 aa12.49□□□□□ -0.41
PRKDC-203ENST00000432581 SCG5P05408 212 aa12.49□□□□□ -0.41
PRKDC-203ENST00000432581 WNT2P09544 360 aa12.49□□□□□ -0.41
PRKDC-203ENST00000432581 RAC2P15153 192 aa12.49□□□□□ -0.41
PRKDC-203ENST00000432581 CD80P33681 288 aa12.49□□□□□ -0.41
PRKDC-203ENST00000432581 SLC9A3P48764 834 aa12.49□□□□□ -0.41
PRKDC-203ENST00000432581 AQP6Q13520 282 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms