RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 LRRN1Q6UXK5 716 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 WDR88Q6ZMY6 472 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 GAREM2Q75VX8 874 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 FCRLAQ7L513 359 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 PPP1R3BQ86XI6 285 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 GLB1L2Q8IW92 636 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 DND1Q8IYX4 353 aaKnown RBP7.28□□□□□ -1.24
VTI1A-202ENST00000432306 CDK20Q8IZL9 346 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 MUC20Q8N307 709 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-202ENST00000432306 OR4D10Q8NGI6 311 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 OR4C6Q8NH72 309 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 SYNPRQ8TBG9 265 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 TFGQ92734 400 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-202ENST00000432306 MS4A6EQ96DS6 147 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 WDR89Q96FK6 387 aaPredicted RBP7.28□□□□□ -1.24
VTI1A-202ENST00000432306 COX14Q96I36 57 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 IL17FQ96PD4 163 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 MS4A4EQ96PG1 132 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 OR14A2Q96R54 314 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 CNN2Q99439 309 aaKnown RBP7.28□□□□□ -1.24
VTI1A-202ENST00000432306 SEMA6CQ9H3T2 930 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 RNF122Q9H9V4 155 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 PARD6AQ9NPB6 346 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 NOX4Q9NPH5 578 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 DNAJB11Q9UBS4 358 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 CHRNA9Q9UGM1 479 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 IL36AQ9UHA7 158 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 TNFSF18Q9UNG2 199 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 MRPS17Q9Y2R5 130 aaKnown RBP7.28□□□□□ -1.24
VTI1A-202ENST00000432306 CFAP47Q6ZTR5 3102 aa7.28□□□□□ -1.24
VTI1A-202ENST00000432306 FXYD6-FXYD2A0A087WZ82 144 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 A0A087WZY1 265 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 HSPB2A8KAH6 182 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 FAM171A2A8MVW0 826 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 LEFTY2O00292 366 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 SULT1C2O00338 296 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 IMPA2O14732 288 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 BCL2L11O43521 198 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 FCMRO60667 390 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 DNAJB6O75190 326 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 RBBP9O75884 186 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 AIFM1O95831 613 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 DBIP07108 87 aaKnown RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 FTH1P19P0C7X4 201 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 CD37P11049 281 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 NID1P14543 1247 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 CDK2P24941 298 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 SLC6A6P31641 620 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 RAB28P51157 221 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 NR0B1P51843 470 aaKnown RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 MFAP4P55083 255 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 CXADRP78310 365 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 PRDX1Q06830 199 aaKnown RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 HSPB2Q16082 182 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 C2orf68Q2NKX9 166 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 AMZ1Q400G9 498 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 RNASE12Q5GAN4 147 aaKnown RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 C9orf64Q5T6V5 341 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 ANKRD16Q6P6B7 361 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 ZNF704Q6ZNC4 412 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 PARS2Q7L3T8 475 aaKnown RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 SLC35F3Q8IY50 421 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 YAF2Q8IY57 180 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 BATF2Q8N1L9 274 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 BPIFCQ8NFQ6 507 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 OR2L5Q8NG80 312 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 OR5AR1Q8NGP9 310 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 OR14C36Q8NHC7 312 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 STOML3Q8TAV4 291 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 POC1BQ8TC44 478 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 CCDC107Q8WV48 283 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 LIPHQ8WWY8 451 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 CLDN23Q96B33 292 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 ZNF707Q96C28 371 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 BPIFA2Q96DR5 249 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 NARS2Q96I59 477 aaKnown RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 SLC41A2Q96JW4 573 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 MRGPRX4Q96LA9 322 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 SLC25A21Q9BQT8 299 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 NMNAT2Q9BZQ4 307 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 EGLN1Q9GZT9 426 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 FXYD6Q9H0Q3 95 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 SAV1Q9H4B6 383 aaPredicted RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 APMAPQ9HDC9 416 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 C20orf141Q9NUB4 165 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 TMEM100Q9NV29 134 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 MRTO4Q9UKD2 239 aaKnown RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 MED31Q9Y3C7 131 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 ATG4BQ9Y4P1 393 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 CKAP5Q14008 2032 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 SDK1Q7Z5N4 2213 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 IGKV1-8A0A0C4DH67 115 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 TRBV2A0A0J9YWF9 115 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 TMEM82A0PJX8 343 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 ARPC3O15145 178 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 OR1F1O43749 312 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 LCMT2O60294 686 aaKnown RBP7.27□□□□□ -1.25
VTI1A-202ENST00000432306 ZNF432O94892 652 aa7.27□□□□□ -1.25
VTI1A-202ENST00000432306 IGF2P01344 180 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms