RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 DECR2Q9NUI1 292 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 B3GNT3Q9Y2A9 372 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 FAM90A27PA6NNH2 459 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 SMIM10L1P0DMW3 83 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 HLA-DMAP28067 261 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 BDKRB2P30411 391 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 GPR119Q8TDV5 335 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 C17orf50Q8WW18 174 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 SMIM10Q96HG1 83 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 SNX18Q96RF0 628 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 MED29Q9NX70 200 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 TCRBV5S2A0A599 114 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 NTN3O00634 580 aaPredicted RBP11.65□□□□□ -0.54
PTCH1-207ENST00000429896 SMIM18P0DKX4 95 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 SULF2Q8IWU5 870 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 OR4F15Q8NGB8 312 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 TMEM43Q9BTV4 400 aa11.65□□□□□ -0.54
PTCH1-207ENST00000429896 CEBPZOSA8MTT3 80 aa11.65□□□□□ -0.55
PTCH1-207ENST00000429896 SGCEO43556 437 aa11.65□□□□□ -0.55
PTCH1-207ENST00000429896 OR8G3PP0DMU2 310 aa11.65□□□□□ -0.55
PTCH1-207ENST00000429896 GRB2P62993 217 aaKnown RBP11.65□□□□□ -0.55
PTCH1-207ENST00000429896 DUSP2Q05923 314 aa11.65□□□□□ -0.55
PTCH1-207ENST00000429896 FAM83FQ8NEG4 500 aaPredicted RBP11.65□□□□□ -0.55
PTCH1-207ENST00000429896 TPPP3Q9BW30 176 aa11.65□□□□□ -0.55
PTCH1-207ENST00000429896 DUSP13Q9UII6 198 aa11.65□□□□□ -0.55
PTCH1-207ENST00000429896 HHLA2Q9UM44 414 aa11.65□□□□□ -0.55
PTCH1-207ENST00000429896 ATP23Q9Y6H3 246 aa11.65□□□□□ -0.55
PTCH1-207ENST00000429896 PTPRZ1P23471 2315 aaPredicted RBP11.65□□□□□ -0.55
PTCH1-207ENST00000429896 A0A0G2JMP0 313 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 RPS2P15880 293 aaKnown RBP11.64□□□□□ -0.55
PTCH1-207ENST00000429896 RPL11P62913 178 aaKnown RBP11.64□□□□□ -0.55
PTCH1-207ENST00000429896 ZFP36L1Q07352 338 aaKnown RBP11.64□□□□□ -0.55
PTCH1-207ENST00000429896 NPSR1Q6W5P4 371 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF620Q6ZNG0 422 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 PRSS33Q8NF86 280 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 OR4M2Q8NGB6 313 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 NIPAL2Q9H841 368 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 TMEM100Q9NV29 134 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 OR2T7P0C7T2 308 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 EXOSC6Q5RKV6 272 aaKnown RBP11.64□□□□□ -0.55
PTCH1-207ENST00000429896 OR2T27Q8NH04 317 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 C3orf49Q96BT1 292 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 MEGF11A6BM72 1044 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 CLN5O75503 358 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 HTD2P86397 168 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 C3P1Q6ZMU1 363 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 TTTY12Q9BZ98 90 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 BET1O15155 118 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 HPGDSO60760 199 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 OR5D14Q8NGL3 314 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 MALSU1Q96EH3 234 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 RPS10P5Q9NQ39 176 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 ALDOBP05062 364 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 HTR2AP28223 471 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.64□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF679Q8IYX0 411 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 A0A096LPE4 126 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 A0A1W2PPZ6 126 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 TMIGD3P0DMS9 266 aaPredicted RBP11.64□□□□□ -0.55
PTCH1-207ENST00000429896 CT45A8P0DMV1 189 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 CT45A9P0DMV2 189 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 HTR1FP30939 366 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 CT45A2Q5DJT8 189 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 TXNDC15Q96J42 360 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 KLK4Q9Y5K2 254 aa11.64□□□□□ -0.55
PTCH1-207ENST00000429896 C4orf51C9J302 202 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 SERPINE2P07093 398 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 BMP5P22003 454 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 COX15Q7KZN9 410 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 DCXRQ7Z4W1 244 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 HRASLS5Q96KN8 279 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 SPSB2Q99619 263 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 EMC7Q9NPA0 242 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 CD300LBA8K4G0 201 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 SSX4O60224 188 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 CDK2P24941 298 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 ATP1B3P54709 279 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF91Q05481 1191 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF74Q16587 644 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 KDM4DQ6B0I6 523 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 SLC22A25Q6T423 547 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 PAQR8Q8TEZ7 354 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 HAS2Q92819 552 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 TAAR8Q969N4 342 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 C12orf10Q9HB07 376 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 DTX4Q9Y2E6 619 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 LTBP2Q14767 1821 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 ARSBP15848 533 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 PCOLCEQ15113 449 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 ZNF511Q8NB15 262 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 BEST4Q8NFU0 473 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 GLRX2Q9NS18 164 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 F8W036 122 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 PRKYO43930 277 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 SEC14L2O76054 403 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 CDK1P06493 297 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 HOXB5P09067 269 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 CSRP3P50461 194 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 BLOC1S1P78537 153 aa11.63□□□□□ -0.55
PTCH1-207ENST00000429896 B3GLCTQ6Y288 498 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms