RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 MSL2Q9HCI7 577 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 SAR1AQ9NR31 198 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 MAN2C1Q9NTJ4 1040 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 UBAP1Q9NZ09 502 aa12.6□□□□□ -0.39
MSH5-208ENST00000429846 ARHGAP32A7KAX9 2087 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 EFCAB9A8MZ26 197 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 SLC22A2O15244 555 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 SPRY1O43609 319 aaPredicted RBP12.59□□□□□ -0.39
MSH5-208ENST00000429846 DOK2O60496 412 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 PRSS23O95084 383 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 IGHV2-70P01814 119 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 LCN2P80188 198 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 PSG7Q13046 419 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 CDK5R2Q13319 367 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 FHL1Q13642 323 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 TMEM155Q4W5P6 130 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 TMEM106BQ9NUM4 274 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 GRHPRQ9UBQ7 328 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 OPN4Q9UHM6 478 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 PURGQ9UJV8 347 aaKnown RBP12.59□□□□□ -0.39
MSH5-208ENST00000429846 POLR3KQ9Y2Y1 108 aaPredicted RBP12.59□□□□□ -0.39
MSH5-208ENST00000429846 CAPN7Q9Y6W3 813 aa12.59□□□□□ -0.39
MSH5-208ENST00000429846 LOC100653049A0A140TA62 436 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 J3QW42 95 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 XKRYO14609 159 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 SURF4O15260 269 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 SGCEO43556 437 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 KRT34O76011 436 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 CD14P08571 375 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 KITLGP21583 273 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 HTR5AP47898 357 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 AQP6Q13520 282 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 ZNF730Q6ZMV8 503 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 KLHL36Q8N4N3 616 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 ZNF283Q8N7M2 679 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 OR13C2Q8NGS9 318 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 ANKRD19PQ9H560 264 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 DDX28Q9NUL7 540 aaKnown RBP12.58□□□□□ -0.4
MSH5-208ENST00000429846 IL19Q9UHD0 177 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 ATPIF1Q9UII2 106 aa12.58□□□□□ -0.4
MSH5-208ENST00000429846 TEX13CA0A0J9YWL9 993 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 A8MXK9 166 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 FFAR1O14842 300 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 RPL4P36578 427 aaKnown RBP12.57□□□□□ -0.4
MSH5-208ENST00000429846 YAP1P46937 504 aaKnown RBP12.57□□□□□ -0.4
MSH5-208ENST00000429846 UBA52P62987 128 aaKnown RBP12.57□□□□□ -0.4
MSH5-208ENST00000429846 ZBED5Q49AG3 693 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 IFI44LQ53G44 452 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 ARMCX4Q5H9R4 360 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 RBMS3Q6XE24 437 aaKnown RBP12.57□□□□□ -0.4
MSH5-208ENST00000429846 TMPRSS11FQ6ZWK6 438 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 MBOAT2Q6ZWT7 520 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 ZNF771Q7L3S4 317 aaPredicted RBP12.57□□□□□ -0.4
MSH5-208ENST00000429846 FAM122BQ7Z309 247 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 VTCN1Q7Z7D3 282 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 ZDHHC22Q8N966 263 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 DVL3Q92997 716 aaPredicted RBP12.57□□□□□ -0.4
MSH5-208ENST00000429846 ZNF570Q96NI8 536 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 ZMAT3Q9HA38 289 aaKnown RBP12.57□□□□□ -0.4
MSH5-208ENST00000429846 PATZ1Q9HBE1 687 aaKnown RBP12.57□□□□□ -0.4
MSH5-208ENST00000429846 ESM1Q9NQ30 184 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 FGFR1OP2Q9NVK5 253 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 PLEK2Q9NYT0 353 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 RHCGQ9UBD6 479 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 TMEM5Q9Y2B1 443 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 ADAM18Q9Y3Q7 739 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 SNX13Q9Y5W8 968 aa12.57□□□□□ -0.4
MSH5-208ENST00000429846 A0A087WUU8 490 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 PRSS37A4D1T9 235 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 H7C1C5 153 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 J3KTA2 159 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 IFNL4K9M1U5 179 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 CDC42EP2O14613 210 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 CPT2P23786 658 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 ZFP36P26651 326 aaKnown RBP12.56□□□□□ -0.4
MSH5-208ENST00000429846 RGS6P49758 472 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 LSM6P62312 80 aaKnown RBP12.56□□□□□ -0.4
MSH5-208ENST00000429846 BTG1P62324 171 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 LCN6P62502 163 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 GUCY1A3Q02108 690 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 TUSC1Q2TAM9 212 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 AWAT1Q58HT5 328 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 SPRNQ5BIV9 151 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 MESTQ5EB52 335 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 CBLL1Q75N03 491 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 VASH1Q7L8A9 365 aaPredicted RBP12.56□□□□□ -0.4
MSH5-208ENST00000429846 RRM2BQ7LG56 351 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 MUC20Q8N307 709 aaPredicted RBP12.56□□□□□ -0.4
MSH5-208ENST00000429846 DEFB108BQ8NET1 73 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 OR2Z1Q8NG97 314 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 RP9Q8TA86 221 aaKnown RBP12.56□□□□□ -0.4
MSH5-208ENST00000429846 GPA33Q99795 319 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 EMC7Q9NPA0 242 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 CMTM6Q9NX76 183 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 PPP1R3CQ9UQK1 317 aa12.56□□□□□ -0.4
MSH5-208ENST00000429846 CXCR6O00574 342 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 ZNF682O95780 498 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 SCG5P05408 212 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 SBK2P0C263 348 aa12.55□□□□□ -0.4
MSH5-208ENST00000429846 H2AFXP16104 143 aaPredicted RBP12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms