RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 POM121L2Q96KW2 1035 aa12.96□□□□□ -0.33
GARNL3-204ENST00000429629 DCLRE1CQ96SD1 692 aaKnown RBP12.96□□□□□ -0.33
GARNL3-204ENST00000429629 HDHD2Q9H0R4 259 aa12.96□□□□□ -0.33
GARNL3-204ENST00000429629 OR51V1Q9H2C8 321 aa12.96□□□□□ -0.33
GARNL3-204ENST00000429629 TUBG2Q9NRH3 451 aa12.96□□□□□ -0.33
GARNL3-204ENST00000429629 NKX1-2Q9UD57 310 aaPredicted RBP12.96□□□□□ -0.33
GARNL3-204ENST00000429629 LHFPL6Q9Y693 200 aa12.96□□□□□ -0.33
GARNL3-204ENST00000429629 OR6C6A6NF89 314 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 FAM171A2A8MVW0 826 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 J3QW42 95 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 ZNF593O00488 134 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-204ENST00000429629 GYPBP06028 91 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 CLUP10909 449 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 NR4A1P22736 598 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 PEX2P28328 305 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 APLNRP35414 380 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 NKX6-1P78426 367 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-204ENST00000429629 GGTLC2Q14390 218 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 RAB35Q15286 201 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 OCLNQ16625 522 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 TBC1D28Q2M2D7 210 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 ZIK1Q3SY52 487 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-204ENST00000429629 ELFN2Q5R3F8 820 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 LCN1P1Q5VSP4 162 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 SLC18B1Q6NT16 456 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 ARL9Q6T311 187 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 VASH1Q7L8A9 365 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-204ENST00000429629 ZNF511Q8NB15 262 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 OR6K6Q8NGW6 343 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 RHOXF1Q8NHV9 184 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 AKAP1Q92667 903 aaKnown RBP eCLIP12.95□□□□□ -0.34
GARNL3-204ENST00000429629 HTRA1Q92743 480 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 RFKQ969G6 155 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 MS4A3Q96HJ5 214 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 INTS14Q96SY0 518 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 MNTQ99583 582 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 COQ7Q99807 217 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 DHRS9Q9BPW9 319 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 ZNF442Q9H7R0 627 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 MED20Q9H944 212 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 IMPAD1Q9NX62 359 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 CISD1Q9NZ45 108 aaKnown RBP12.95□□□□□ -0.34
GARNL3-204ENST00000429629 WARS2Q9UGM6 360 aaKnown RBP12.95□□□□□ -0.34
GARNL3-204ENST00000429629 FBXO9Q9UK97 447 aaPredicted RBP12.95□□□□□ -0.34
GARNL3-204ENST00000429629 GMPPBQ9Y5P6 360 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 COMMD3-BMI1R4GMX3 469 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 FBN2P35556 2912 aa12.95□□□□□ -0.34
GARNL3-204ENST00000429629 H0YAE9 185 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 SYNGR3O43761 229 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 PLAUP00749 431 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 CELA3BP08861 270 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 CALCRP30988 508 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 APOBEC3AP31941 199 aaPredicted RBP12.94□□□□□ -0.34
GARNL3-204ENST00000429629 GLRXP35754 106 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 RAD52P43351 418 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 GDI2P50395 445 aaKnown RBP12.94□□□□□ -0.34
GARNL3-204ENST00000429629 NUDT6P53370 316 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 ADAM8P78325 824 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 HGFACQ04756 655 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 IL18R1Q13478 541 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 MEP1BQ16820 701 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 LRRC36Q1X8D7 754 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 KRTAP27-1Q3LI81 207 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 KLHL12Q53G59 568 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 CCDC92Q53HC0 331 aaPredicted RBP12.94□□□□□ -0.34
GARNL3-204ENST00000429629 MYPOPQ86VE0 399 aaPredicted RBP12.94□□□□□ -0.34
GARNL3-204ENST00000429629 GALNT4Q8N4A0 578 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 ZNF555Q8NEP9 628 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 OR51L1Q8NGJ5 315 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 OR1F12Q8NHA8 337 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 NINJ1Q92982 152 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 FBXW5Q969U6 566 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 OTULINQ96BN8 352 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 Q96MT0 163 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 FOXN4Q96NZ1 517 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 IL4I1Q96RQ9 567 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 YIPF3Q9GZM5 350 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 VCX3BQ9H321 246 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 DDX28Q9NUL7 540 aaKnown RBP12.94□□□□□ -0.34
GARNL3-204ENST00000429629 FAIMQ9NVQ4 179 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 PLEK2Q9NYT0 353 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 GDF2Q9UK05 429 aaPredicted RBP12.94□□□□□ -0.34
GARNL3-204ENST00000429629 POLR1DQ9Y2S0 133 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 HSPE1-MOB4S4R3N1 261 aa12.94□□□□□ -0.34
GARNL3-204ENST00000429629 APCP25054 2843 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 LOC100509620A0A075B734 347 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 SNTNA6NMZ2 147 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 E7EQL1 145 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 RER1O15258 196 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 GPANK1O95872 356 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 APEX1P27695 318 aaKnown RBP12.93□□□□□ -0.34
GARNL3-204ENST00000429629 HTR1FP30939 366 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 EVX1P49640 407 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 CDH11P55287 796 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 UCP2P55851 309 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 RPS23P62266 143 aaKnown RBP12.93□□□□□ -0.34
GARNL3-204ENST00000429629 ADARB1P78563 741 aaKnown RBP12.93□□□□□ -0.34
GARNL3-204ENST00000429629 POU4F2Q12837 409 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 APOFQ13790 326 aa12.93□□□□□ -0.34
GARNL3-204ENST00000429629 ZNF774Q6NX45 483 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms