RNA–Protein interactions for RNA: ENST00000429102.6

CDH3-202, Transcript of cadherin 3, humanhuman

TSL 1 (best) BASIC

Gene CDH3, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-202ENST00000429102 SHARPINQ9H0F6 387 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 PTGES2Q9H7Z7 377 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 TRAV14DV4A0A0A6YYC5 116 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 OR14I1A6ND48 311 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 EFCAB7A8K855 629 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 KRBOX1C9JBD0 128 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 F8W036 122 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 SRPX2O60687 465 aaPredicted RBP11.23□□□□□ -0.61
CDH3-202ENST00000429102 KCNJ13O60928 360 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 OR2A4O95047 310 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 NPY4RP50391 375 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 RIDAP52758 137 aaKnown RBP11.23□□□□□ -0.61
CDH3-202ENST00000429102 BLOC1S1P78537 153 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 ZNF117Q03924 483 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 GUCA2BQ16661 112 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 ATPAF1Q5TC12 328 aaPredicted RBP11.23□□□□□ -0.61
CDH3-202ENST00000429102 CDCP2Q5VXM1 449 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 TMEM225Q6GV28 225 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 TMEM71Q6P5X7 295 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 INO80EQ8NBZ0 244 aaPredicted RBP11.23□□□□□ -0.61
CDH3-202ENST00000429102 OR4D6Q8NGJ1 314 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 DCUN1D4Q92564 292 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 OR2A7Q96R45 310 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 ACKR4Q9NPB9 350 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 PIAS3Q9Y6X2 628 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 A0A1W2PP11 408 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 TMEM212A6NML5 194 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 SNRPGP15A8MWD9 76 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 SEMA4FO95754 770 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 ERCC1P07992 297 aaPredicted RBP11.23□□□□□ -0.61
CDH3-202ENST00000429102 HRH1P35367 487 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 S100A10P60903 97 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 PMPCAQ10713 525 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 SLC17A1Q14916 467 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 CLEC9AQ6UXN8 241 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 CDC20BQ86Y33 519 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 OR6N1Q8NGY5 312 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 THAP6Q8TBB0 222 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 SOX7Q9BT81 388 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 SMIM3Q9BZL3 60 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 FOXQ1Q9C009 403 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 ZCCHC4Q9H5U6 513 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 MKL2Q9ULH7 1088 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 PCDHB10Q9UN67 800 aa11.23□□□□□ -0.61
CDH3-202ENST00000429102 NUP210Q8TEM1 1887 aaPredicted RBP11.23□□□□□ -0.61
CDH3-202ENST00000429102 A0A1B0GW55 424 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 SULT1B1O43704 296 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 DUX4L2P0CJ85 424 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 DUX4L3P0CJ86 424 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 DUX4L4P0CJ87 422 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 DUX4L5P0CJ88 424 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 DUX4L6P0CJ89 424 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 DUX4L7P0CJ90 424 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 CPN1P15169 458 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 PGAM2P15259 253 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 CTRB1P17538 263 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 PVALBP20472 110 aaPredicted RBP11.22□□□□□ -0.61
CDH3-202ENST00000429102 GPR3P46089 330 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 PRMT2P55345 433 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 SRSF3P84103 164 aaKnown RBP11.22□□□□□ -0.61
CDH3-202ENST00000429102 EIF2B5Q13144 721 aaKnown RBP11.22□□□□□ -0.61
CDH3-202ENST00000429102 RBM39Q14498 530 aaKnown RBP11.22□□□□□ -0.61
CDH3-202ENST00000429102 SLC35D3Q5M8T2 416 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 CTRB2Q6GPI1 263 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 SLC18B1Q6NT16 456 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 Q6ZS52 159 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 FAM122BQ7Z309 247 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 OR2W3Q7Z3T1 314 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 ATG4DQ86TL0 474 aaPredicted RBP11.22□□□□□ -0.61
CDH3-202ENST00000429102 FJX1Q86VR8 437 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 BHLHE23Q8NDY6 225 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 FAM71F1Q96KD3 344 aaPredicted RBP11.22□□□□□ -0.61
CDH3-202ENST00000429102 NMNAT2Q9BZQ4 307 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 DUX4Q9UBX2 424 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 LRP12Q9Y561 859 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 ADAP1O75689 374 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 CD1CP29017 333 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 SCRN3Q0VDG4 424 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 FAM180AQ6UWF9 173 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 OTOSQ8NHW6 89 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 MARCH1Q8TCQ1 289 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 WBP1Q96G27 269 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 GPER1Q99527 375 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 PLEKHA1Q9HB21 404 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 DOCK8Q8NF50 2099 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 IGHV5-51A0A0C4DH38 117 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 LOC107986453A0A1B0GWG9 222 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 FBXO24O75426 580 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 MPIG6BO95866 241 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 IL5P05113 134 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 GLAP06280 429 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 BDKRB2P30411 391 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 CTHP32929 405 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 TAS2R19P59542 299 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 PLCXD2Q0VAA5 305 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 FAM69BQ5VUD6 431 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 LCN10Q6JVE6 187 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 CLEC1AQ8NC01 280 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 ELP5Q8TE02 316 aa11.22□□□□□ -0.61
CDH3-202ENST00000429102 CCDC107Q8WV48 283 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms