RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 PRSS54Q6PEW0 395 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 RFLNBQ8N5W9 214 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 KLK6Q92876 244 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 COX14Q96I36 57 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 PHB2Q99623 299 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 METTL9Q9H1A3 318 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 POFUT1Q9H488 388 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 LHX6Q9UPM6 363 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 LOC100289279A0A1B0GTE1 492 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR5H15A6NDH6 313 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR5H1A6NKK0 313 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 TOX3O15405 576 aaPredicted RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 CLTBP09497 229 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 EIPR1Q53HC9 387 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR10K2Q6IF99 312 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 DTWD2Q8NBA8 298 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR5L2Q8NGL0 311 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ASB17Q8WXJ9 295 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 DTD2Q96FN9 168 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 C4orf45Q96LM5 186 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 CCNL2Q96S94 520 aaPredicted RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 ZNF587Q96SQ5 575 aaPredicted RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 PFDN5Q99471 154 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 PTGES2Q9H7Z7 377 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ADAM18Q9Y3Q7 739 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 TMEM14AQ9Y6G1 99 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 A0A087X0M5 115 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 A0A1B0GX30 115 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 TMEM72A0PK05 275 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 GLCEO94923 617 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 IFNA2P01563 188 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 GTF2F2P13984 249 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 RAB5CP51148 216 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 PPP1R1AQ13522 171 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 RAB33AQ14088 237 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 DUSP5Q16690 384 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 C9orf152Q5JTZ5 239 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 HSD11B1LQ7Z5J1 315 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 RANBP3LQ86VV4 465 aaPredicted RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 VRK2Q86Y07 508 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 CCDC116Q8IYX3 515 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 LRRC18Q8N456 261 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR2A1Q8NGT9 310 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 SUSD6Q92537 303 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 MARS2Q96GW9 593 aaKnown RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 MRPL37Q9BZE1 423 aaKnown RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 PELI2Q9HAT8 420 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ASF1BQ9NVP2 202 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 TMEM242Q9NWH2 141 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 CLEC4AQ9UMR7 237 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 C5AR1P21730 350 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 EDNRAP25101 427 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 THBS4P35443 961 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 PKIAP61925 76 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 TLE2Q04725 743 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 DUSP2Q05923 314 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 LMAN2Q12907 356 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ALKBH1Q13686 389 aaKnown RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 ZNF234Q14588 700 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 FAM46CQ5VWP2 391 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 SLC39A5Q6ZMH5 540 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ZNF574Q6ZN55 896 aaPredicted RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 DPPA4Q7L190 304 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 PEG10Q86TG7 708 aaKnown RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 ZFP82Q8N141 532 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR56B1Q8NGI3 324 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR13C2Q8NGS9 318 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR51A7Q8NH64 312 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR5R1Q8NH85 324 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 PIGKQ92643 395 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ZBTB8AQ96BR9 441 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 FOXRED1Q96CU9 486 aaPredicted RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 RCC1LQ96I51 464 aaKnown RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 DPH1Q9BZG8 443 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 SLC35B3Q9H1N7 401 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 RAB18Q9NP72 206 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 PLA2G2EQ9NZK7 142 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ZC3H12DA2A288 527 aaKnown RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 NTN1O95631 604 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ERCC1P07992 297 aaPredicted RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 NGFRP08138 427 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 RNF224P0DH78 156 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 FCARP24071 287 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ITPKBP27987 946 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ARRB1P49407 418 aaPredicted RBP4.63□□□□□ -1.67
RIF1-203ENST00000428287 C2orf76Q3KRA6 126 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 CXCL17Q6UXB2 119 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 TMPRSS12Q86WS5 348 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 NUP43Q8NFH3 380 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR5K2Q8NHB8 316 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ZNF559Q9BR84 538 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 IL21Q9HBE4 155 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 CHD8Q9HCK8 2581 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 POM121BA6NF01 834 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 FIGNL2A6NMB9 653 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 OR2AT4A6NND4 320 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 SEC11BP0C7V7 166 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 ZIC1Q15915 447 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 HAGHQ16775 308 aa4.63□□□□□ -1.67
RIF1-203ENST00000428287 DPY19L2P2Q6ZN68 376 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms