RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ACTL7AQ9Y615 435 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 CACNA1SQ13698 1873 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 KCNJ3P48549 501 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 CCR6P51684 374 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 PLA1AQ53H76 456 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 TMEM182Q6ZP80 229 aaPredicted RBP13.25□□□□□ -0.29
PTPN13-203ENST00000427191 PCYT2Q99447 389 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 C1QTNF3Q9BXJ4 246 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 SPAG17Q6Q759 2223 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 ICE1Q9Y2F5 2266 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 CBY3A6NI87 242 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 RFPL4AA6NLU0 287 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 RFPL4AL1F8VTS6 287 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 SSSCA1O60232 199 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 CXCL12P48061 93 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 RPL27P61353 136 aaKnown RBP13.25□□□□□ -0.29
PTPN13-203ENST00000427191 HSF1Q00613 529 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 OR5I1Q13606 314 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 C1orf140Q5VVS0 124 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 H1FXQ92522 213 aaKnown RBP13.25□□□□□ -0.29
PTPN13-203ENST00000427191 NMNAT3Q96T66 252 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 UCK1Q9HA47 277 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 DUSP22Q9NRW4 184 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 OBP2AQ9NY56 170 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 EMCNQ9ULC0 261 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 A6NIN4 97 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 TIMP1P01033 207 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 CSNK1G2P78368 415 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 HSD17B8Q92506 261 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 OPALINQ96PE5 141 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 COMMD5Q9GZQ3 224 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 TXNRD2Q9NNW7 524 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 NTF3P20783 257 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 SHC1P29353 583 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 OR2AK2Q8NG84 335 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 HS3ST2Q9Y278 367 aa13.25□□□□□ -0.29
PTPN13-203ENST00000427191 P2RY10O00398 339 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 GPR85P60893 370 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 DCTN6O00399 190 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 ALDOCP09972 364 aaKnown RBP13.24□□□□□ -0.29
PTPN13-203ENST00000427191 SOX4Q06945 474 aaPredicted RBP13.24□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF761Q86XN6 746 aaPredicted RBP13.24□□□□□ -0.29
PTPN13-203ENST00000427191 ST8SIA4Q92187 359 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 SAT2Q96F10 170 aaPredicted RBP13.24□□□□□ -0.29
PTPN13-203ENST00000427191 SLC5A10A0PJK1 596 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 CYB561P49447 251 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 DEFB133Q30KQ1 61 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 DCXRQ7Z4W1 244 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 CAMKMTQ7Z624 323 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 LHX4Q969G2 390 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.24□□□□□ -0.29
PTPN13-203ENST00000427191 IGKV6D-21A0A0A0MT36 114 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 A0A1B0GWA3 101 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 CBR1P16152 277 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 RPS19P39019 145 aaKnown RBP13.24□□□□□ -0.29
PTPN13-203ENST00000427191 AKR1C3P42330 323 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 PARS2Q7L3T8 475 aaKnown RBP13.24□□□□□ -0.29
PTPN13-203ENST00000427191 TNFRSF13CQ96RJ3 184 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 FAM234AQ9H0X4 552 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 UBE2MP61081 183 aaKnown RBP13.24□□□□□ -0.29
PTPN13-203ENST00000427191 MS4A8Q9BY19 250 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 AMBRA1Q9C0C7 1298 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 ZDHHC11Q9H8X9 412 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 TJP1Q07157 1748 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 CTNSO60931 367 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 RPL12P30050 165 aaKnown RBP13.24□□□□□ -0.29
PTPN13-203ENST00000427191 KIAA1024LP59773 190 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 LTC4SQ16873 150 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 NHSL2Q5HYW2 709 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 ZNF534Q76KX8 674 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 ARHGEF39Q8N4T4 335 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 DCBLD2Q96PD2 775 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 UBQLN3Q9H347 655 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 AAMDCQ9H7C9 122 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 ACOXLQ9NUZ1 547 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 TIMM10BQ9Y5J6 103 aa13.24□□□□□ -0.29
PTPN13-203ENST00000427191 SERTM2A0A1B0GWG4 89 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 A6NL46 340 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 LGI1O95970 557 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 TFAP2AP05549 437 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 HIST1H3AP68431 136 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 PITX1P78337 314 aaPredicted RBP13.23□□□□□ -0.29
PTPN13-203ENST00000427191 ETFRF1Q6IPR1 90 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 PIANPQ8IYJ0 282 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 ANGPTL6Q8NI99 470 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 SLC48A1Q6P1K1 146 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 M0QYG6 137 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 GCAP28676 217 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 ZADH2Q8N4Q0 377 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 TMEM104Q8NE00 496 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 EGLN2Q96KS0 407 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 ATP13A2Q9NQ11 1180 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 ADPRHP54922 357 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 SYS1Q8N2H4 156 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 SLC39A7Q92504 469 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 NOL4LQ96MY1 436 aaPredicted RBP13.23□□□□□ -0.29
PTPN13-203ENST00000427191 MED20Q9H944 212 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 CHST11Q9NPF2 352 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 SLCO1B1Q9Y6L6 691 aa13.23□□□□□ -0.29
PTPN13-203ENST00000427191 FAM24AA6NFZ4 105 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms