RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 LIME1Q9H400 295 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 C1orf198Q9H425 327 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 UBTD1Q9HAC8 227 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 POU2F3Q9UKI9 436 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 NDRG4Q9ULP0 352 aaKnown RBP21.2■□□□□ 0.98
VEGFA-209ENST00000425836 ATP23Q9Y6H3 246 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 ABCA4P78363 2273 aa21.2■□□□□ 0.98
VEGFA-209ENST00000425836 HS3ST1O14792 307 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 SGCEO43556 437 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 PSKH1P11801 424 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 STOMP27105 288 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 GSTT1P30711 240 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 RPS27P42677 84 aaKnown RBP21.19■□□□□ 0.98
VEGFA-209ENST00000425836 HGFACQ04756 655 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 APOFQ13790 326 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 CCDC92Q53HC0 331 aaPredicted RBP21.19■□□□□ 0.98
VEGFA-209ENST00000425836 GJC3Q8NFK1 279 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 FAM81AQ8TBF8 368 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 UBE2FQ969M7 185 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 POM121L2Q96KW2 1035 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 PITX2Q99697 317 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 FAM118AQ9NWS6 357 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 CISD1Q9NZ45 108 aaKnown RBP21.19■□□□□ 0.98
VEGFA-209ENST00000425836 CENPEQ02224 2701 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 LOC100509620A0A075B734 347 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 E7EQL1 145 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 ZNF593O00488 134 aaPredicted RBP21.19■□□□□ 0.98
VEGFA-209ENST00000425836 APLNRP35414 380 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 ENTPD1P49961 510 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 RPS7P62081 194 aaKnown RBP21.19■□□□□ 0.98
VEGFA-209ENST00000425836 PCK2Q16822 640 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 VASH1Q7L8A9 365 aaPredicted RBP21.19■□□□□ 0.98
VEGFA-209ENST00000425836 PAQR4Q8N4S7 273 aaPredicted RBP21.19■□□□□ 0.98
VEGFA-209ENST00000425836 OR8J1Q8NGP2 316 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 TEAD3Q99594 435 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 MARCH7Q9H992 704 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 PLEK2Q9NYT0 353 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 GMPPBQ9Y5P6 360 aa21.19■□□□□ 0.98
VEGFA-209ENST00000425836 LOC100130705A0A1B0GUX0 176 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 CCDC182A6NF36 153 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 DOK2O60496 412 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 TBC1D28Q2M2D7 210 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 TEX30Q5JUR7 227 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 NXNL2Q5VZ03 156 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 TIGD4Q8IY51 512 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 OR4F15Q8NGB8 312 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 OR1J2Q8NGS2 313 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 OR2AJ1Q8NGZ0 328 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 NRG4Q8WWG1 115 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 TRUB1Q8WWH5 349 aaKnown RBP21.18■□□□□ 0.98
VEGFA-209ENST00000425836 IMPAD1Q9NX62 359 aa21.18■□□□□ 0.98
VEGFA-209ENST00000425836 GDF2Q9UK05 429 aaPredicted RBP21.18■□□□□ 0.98
VEGFA-209ENST00000425836 CYSRT1A8MQ03 144 aa21.17■□□□□ 0.98
VEGFA-209ENST00000425836 SLC16A6O15403 523 aa21.17■□□□□ 0.98
VEGFA-209ENST00000425836 SYNGR3O43761 229 aa21.17■□□□□ 0.98
VEGFA-209ENST00000425836 COX5BP10606 129 aa21.17■□□□□ 0.98
VEGFA-209ENST00000425836 RIPK1Q13546 671 aa21.17■□□□□ 0.98
VEGFA-209ENST00000425836 CFAP77Q6ZQR2 320 aa21.17■□□□□ 0.98
VEGFA-209ENST00000425836 ERI1Q8IV48 349 aaKnown RBP21.17■□□□□ 0.98
VEGFA-209ENST00000425836 INTS14Q96SY0 518 aa21.17■□□□□ 0.98
VEGFA-209ENST00000425836 CDH20Q9HBT6 801 aa21.17■□□□□ 0.98
VEGFA-209ENST00000425836 H2AFY2Q9P0M6 372 aaPredicted RBP21.17■□□□□ 0.98
VEGFA-209ENST00000425836 CADP27708 2225 aa21.16■□□□□ 0.98
VEGFA-209ENST00000425836 C5orf49A4QMS7 147 aa21.16■□□□□ 0.98
VEGFA-209ENST00000425836 TMCC2O75069 709 aa21.16■□□□□ 0.98
VEGFA-209ENST00000425836 SPARCP09486 303 aa21.16■□□□□ 0.98
VEGFA-209ENST00000425836 HTR5AP47898 357 aa21.16■□□□□ 0.98
VEGFA-209ENST00000425836 GDI2P50395 445 aaKnown RBP21.16■□□□□ 0.98
VEGFA-209ENST00000425836 RAB35Q15286 201 aa21.16■□□□□ 0.98
VEGFA-209ENST00000425836 MEPCEQ7L2J0 689 aaKnown RBP21.16■□□□□ 0.98
VEGFA-209ENST00000425836 ZNF611Q8N823 705 aa21.16■□□□□ 0.98
VEGFA-209ENST00000425836 NUP37Q8NFH4 326 aa21.16■□□□□ 0.98
VEGFA-209ENST00000425836 FBXW5Q969U6 566 aa21.16■□□□□ 0.98
VEGFA-209ENST00000425836 MAP6Q96JE9 813 aa21.16■□□□□ 0.98
VEGFA-209ENST00000425836 OR6C6A6NF89 314 aa21.15■□□□□ 0.98
VEGFA-209ENST00000425836 CCNOP22674 350 aa21.15■□□□□ 0.98
VEGFA-209ENST00000425836 NR4A1P22736 598 aa21.15■□□□□ 0.98
VEGFA-209ENST00000425836 NKX6-1P78426 367 aaPredicted RBP21.15■□□□□ 0.98
VEGFA-209ENST00000425836 ELFN2Q5R3F8 820 aa21.15■□□□□ 0.98
VEGFA-209ENST00000425836 KRT80Q6KB66 452 aa21.15■□□□□ 0.98
VEGFA-209ENST00000425836 TMEM154Q6P9G4 183 aa21.15■□□□□ 0.98
VEGFA-209ENST00000425836 OR1F12Q8NHA8 337 aa21.15■□□□□ 0.98
VEGFA-209ENST00000425836 DHRS9Q9BPW9 319 aa21.15■□□□□ 0.98
VEGFA-209ENST00000425836 PNRC2Q9NPJ4 139 aaKnown RBP21.15■□□□□ 0.98
VEGFA-209ENST00000425836 RRP15Q9Y3B9 282 aaKnown RBP21.15■□□□□ 0.98
VEGFA-209ENST00000425836 HRNRQ86YZ3 2850 aaPredicted RBP21.15■□□□□ 0.98
VEGFA-209ENST00000425836 SELENOFO60613 162 aa21.14■□□□□ 0.98
VEGFA-209ENST00000425836 ATP6V1G2O95670 118 aa21.14■□□□□ 0.98
VEGFA-209ENST00000425836 DPY19L4Q7Z388 723 aa21.14■□□□□ 0.98
VEGFA-209ENST00000425836 GID4Q8IVV7 300 aa21.14■□□□□ 0.98
VEGFA-209ENST00000425836 ZNF555Q8NEP9 628 aa21.14■□□□□ 0.98
VEGFA-209ENST00000425836 OR6N2Q8NGY6 317 aa21.14■□□□□ 0.98
VEGFA-209ENST00000425836 CA10Q9NS85 328 aa21.14■□□□□ 0.98
VEGFA-209ENST00000425836 SNRPGP62308 76 aaKnown RBP21.14■□□□□ 0.97
VEGFA-209ENST00000425836 GALK2Q01415 458 aa21.14■□□□□ 0.97
VEGFA-209ENST00000425836 KEAP1Q14145 624 aa21.14■□□□□ 0.97
VEGFA-209ENST00000425836 LCN1P1Q5VSP4 162 aa21.14■□□□□ 0.97
VEGFA-209ENST00000425836 C20orf204Q6ZNR8 217 aa21.14■□□□□ 0.97
VEGFA-209ENST00000425836 DCXRQ7Z4W1 244 aa21.14■□□□□ 0.97
VEGFA-209ENST00000425836 SMAP2Q8WU79 429 aaPredicted RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms