RNA–Protein interactions for RNA: ENST00000425443.6

COL12A1-205, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 3,135 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-205ENST00000425443 GUCA2AQ02747 115 aa11.71□□□□□ -0.53
COL12A1-205ENST00000425443 ELAVL1Q15717 326 aaKnown RBP11.71□□□□□ -0.53
COL12A1-205ENST00000425443 BAIAP2L2Q6UXY1 529 aa11.71□□□□□ -0.53
COL12A1-205ENST00000425443 LRRTM1Q86UE6 522 aa11.71□□□□□ -0.53
COL12A1-205ENST00000425443 Q8NFD4 153 aa11.71□□□□□ -0.53
COL12A1-205ENST00000425443 METTL21AQ8WXB1 218 aa11.71□□□□□ -0.53
COL12A1-205ENST00000425443 AMELYQ99218 206 aa11.71□□□□□ -0.53
COL12A1-205ENST00000425443 ZNF251Q9BRH9 671 aa11.71□□□□□ -0.53
COL12A1-205ENST00000425443 CRB3Q9BUF7 120 aa11.71□□□□□ -0.53
COL12A1-205ENST00000425443 RTN4RQ9BZR6 473 aa11.71□□□□□ -0.53
COL12A1-205ENST00000425443 MRPS17Q9Y2R5 130 aaKnown RBP11.71□□□□□ -0.53
COL12A1-205ENST00000425443 MAB21L2Q9Y586 359 aa11.71□□□□□ -0.53
COL12A1-205ENST00000425443 FREM3P0C091 2139 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 MBTPS2O43462 519 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 AKR7A3O95154 331 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 GP1BBP13224 206 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 CSRP1P21291 193 aaKnown RBP11.71□□□□□ -0.54
COL12A1-205ENST00000425443 ZNF117Q03924 483 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 TSC22D1Q15714 1073 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 ISXQ2M1V0 245 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 ELFN2Q5R3F8 820 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 DCAF12L2Q5VW00 463 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 DND1Q8IYX4 353 aaKnown RBP11.71□□□□□ -0.54
COL12A1-205ENST00000425443 OR6V1Q8N148 313 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 FAM71CQ8NEG0 241 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 DVL3Q92997 716 aaPredicted RBP11.71□□□□□ -0.54
COL12A1-205ENST00000425443 TAAR8Q969N4 342 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 GINS4Q9BRT9 223 aa11.71□□□□□ -0.54
COL12A1-205ENST00000425443 NUP210LQ5VU65 1888 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 TCRBV16S1A1N1A0A5B0 115 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 FITM1A5D6W6 292 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 MST1P26927 711 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 PSMA6P60900 246 aaKnown RBP11.7□□□□□ -0.54
COL12A1-205ENST00000425443 EGR4Q05215 589 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 LTBQ06643 244 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 DMWDQ09019 674 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 OLFML2AQ68BL7 652 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 ZNF626Q68DY1 528 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 ALKAL2Q6UX46 152 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 EXD3Q8N9H8 876 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 OR51D1Q8NGF3 324 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 OR1L3Q8NH93 324 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 STK35Q8TDR2 534 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 HAVCR1Q96D42 359 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 GPX7Q96SL4 187 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-205ENST00000425443 ZMAT3Q9HA38 289 aaKnown RBP11.7□□□□□ -0.54
COL12A1-205ENST00000425443 EXOSC3Q9NQT5 275 aaKnown RBP11.7□□□□□ -0.54
COL12A1-205ENST00000425443 VSX1Q9NZR4 365 aaPredicted RBP11.7□□□□□ -0.54
COL12A1-205ENST00000425443 KCNG2Q9UJ96 466 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 SUSD5O60279 629 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 ABHD16AO95870 558 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 CD1AP06126 327 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 PGCP20142 388 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 HOXA6P31267 233 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 CCKBRP32239 447 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 ATRAIDQ6UW56 229 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 FAM122BQ7Z309 247 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 COQ8AQ8NI60 647 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 LAT2Q9GZY6 243 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 COMMD4Q9H0A8 199 aa11.7□□□□□ -0.54
COL12A1-205ENST00000425443 CDV3Q9UKY7 258 aaKnown RBP11.7□□□□□ -0.54
COL12A1-205ENST00000425443 KIF26BQ2KJY2 2108 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 PCNX3Q9H6A9 2034 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 C2orf72A6NCS6 295 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 MCRIP1C9JLW8 97 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 ASAH2BP0C7U1 165 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 FOLR1P15328 257 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 ART1P52961 327 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 DCAF7P61962 342 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 ETFDHQ16134 617 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 MEP1BQ16820 701 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 PCGF3Q3KNV8 242 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 FAM76BQ5HYJ3 339 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 FNDC7Q5VTL7 733 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 ZFP82Q8N141 532 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 KDF1Q8NAX2 398 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-205ENST00000425443 ZNF721Q8TF20 911 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 PHYHIPQ92561 330 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 RHOVQ96L33 236 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 TSPAN32Q96QS1 320 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 CHST6Q9GZX3 395 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 TAS2R5Q9NYW4 299 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 IGHV1OR21-1A0A087WYE8 117 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 CDC40O60508 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
COL12A1-205ENST00000425443 KDM4BO94953 1096 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 NDUFB6O95139 128 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 DDAH2O95865 285 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 IFNGR1P15260 489 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 FOSL2P15408 326 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 MAPK3P27361 379 aaPredicted RBP11.69□□□□□ -0.54
COL12A1-205ENST00000425443 SLC25A1P53007 311 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 NXPH1P58417 271 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 DHODHQ02127 395 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 MESTQ5EB52 335 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 MDGA2Q7Z553 956 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 ADGRG3Q86Y34 549 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 LRRC75AQ8NAA5 344 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 ZSCAN1Q8NBB4 408 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 PLPP7Q8NBV4 271 aa11.69□□□□□ -0.54
COL12A1-205ENST00000425443 THAP3Q8WTV1 239 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms