RNA–Protein interactions for RNA: ENST00000424438.5

RPUSD3-204, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2 BASIC

Gene RPUSD3, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-204ENST00000424438 RBM4BQ9BQ04 359 aaKnown RBP13.02□□□□□ -0.33
RPUSD3-204ENST00000424438 PRSS27Q9BQR3 290 aa13.02□□□□□ -0.33
RPUSD3-204ENST00000424438 POLR2J2Q9GZM3 115 aaKnown RBP13.02□□□□□ -0.33
RPUSD3-204ENST00000424438 POLR2J3Q9H1A7 115 aaKnown RBP13.02□□□□□ -0.33
RPUSD3-204ENST00000424438 IKZF5Q9H5V7 419 aa13.02□□□□□ -0.33
RPUSD3-204ENST00000424438 SLAMF8Q9P0V8 285 aa13.02□□□□□ -0.33
RPUSD3-204ENST00000424438 SLC7A7Q9UM01 511 aa13.02□□□□□ -0.33
RPUSD3-204ENST00000424438 HTR3EA5X5Y0 456 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 CPSF4LA6NMK7 179 aaKnown RBP13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 SLC2A10O95528 541 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 GPANK1O95872 356 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 KITP10721 976 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 UMPSP11172 480 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 OMGP23515 440 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 AQP1P29972 269 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 CDAP32320 146 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 PCGF2P35227 344 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 MMP16P51512 607 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 STX1BP61266 288 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 RELBQ01201 579 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 DEFB112Q30KQ8 113 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 PTOV1Q86YD1 416 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 KLBQ86Z14 1044 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 SMYD1Q8NB12 490 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 HAVCR1Q96D42 359 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 SPDL1Q96EA4 605 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 NEIL1Q96FI4 390 aaPredicted RBP13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 SLC30A2Q9BRI3 323 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 TXNIPQ9H3M7 391 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 TMEM165Q9HC07 324 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 KCNK9Q9NPC2 374 aa13.01□□□□□ -0.33
RPUSD3-204ENST00000424438 IGKV1D-43A0A0B4J1Z2 117 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 SLC22A31A6NKX4 558 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 OR7A10O76100 309 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 F13BP05160 661 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 RPS2P15880 293 aaKnown RBP13□□□□□ -0.33
RPUSD3-204ENST00000424438 SELEP16581 610 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 GUCA1AP43080 201 aaPredicted RBP13□□□□□ -0.33
RPUSD3-204ENST00000424438 GNB2P62879 340 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 ERVK-25P63136 954 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 SGCAQ16586 387 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 PATL1Q86TB9 770 aaKnown RBP13□□□□□ -0.33
RPUSD3-204ENST00000424438 TSPYL5Q86VY4 417 aaPredicted RBP13□□□□□ -0.33
RPUSD3-204ENST00000424438 OR2Z1Q8NG97 314 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 OR10S1Q8NGN2 331 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 ITLN1Q8WWA0 313 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 RASSF5Q8WWW0 418 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 DYRK2Q92630 601 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 HDAC2Q92769 488 aaKnown RBP13□□□□□ -0.33
RPUSD3-204ENST00000424438 TAF15Q92804 592 aaKnown RBP eCLIP13□□□□□ -0.33
RPUSD3-204ENST00000424438 ZDHHC16Q969W1 377 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 CPPED1Q9BRF8 314 aaPredicted RBP13□□□□□ -0.33
RPUSD3-204ENST00000424438 GCM1Q9NP62 436 aa13□□□□□ -0.33
RPUSD3-204ENST00000424438 C12orf71A8MTZ7 269 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 M0QX08 132 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 KPNA4O00629 521 aaPredicted RBP12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 PHYHO14832 338 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 TNFRSF13BO14836 293 aaPredicted RBP12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 ABHD16AO95870 558 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 RAC2P15153 192 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 FUT1P19526 365 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 CD247P20963 164 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 LAP3P28838 519 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 PROK1P58294 105 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 SRSF4Q08170 494 aaKnown RBP12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 CD47Q08722 323 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 TAF9Q16594 264 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 PAGE3Q5JUK9 113 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 GPR157Q5UAW9 335 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 FIP1L1Q6UN15 594 aaKnown RBP12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 EPGNQ6UW88 154 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 ZNF620Q6ZNG0 422 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 NLRC3Q7RTR2 1065 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 FITM2Q8N6M3 262 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 OR4D11Q8NGI4 311 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 SSMEM1Q8WWF3 244 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 RBP7Q96R05 134 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 OR2V2Q96R30 315 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 PAIP2Q9BPZ3 127 aaKnown RBP12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 CHIAQ9BZP6 476 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 ATPIF1Q9UII2 106 aa12.99□□□□□ -0.33
RPUSD3-204ENST00000424438 MDFIC2A0A1B0GVS7 189 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 A0A1B0GWJ7 208 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 PIN1P1O15428 100 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 MSR1P21757 451 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 AQP2P41181 271 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 FMODQ06828 376 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 ENDOGQ14249 297 aaKnown RBP12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 ZNF404Q494X3 552 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 RUNDC3AQ59EK9 446 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 DLEU7Q6UYE1 221 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 C1orf87Q8N0U7 546 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 OR8B3Q8NGG8 313 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 PTP4A1Q93096 173 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 SGTBQ96EQ0 304 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 OR8B2Q96RD0 313 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 NUDT16L1Q9BRJ7 211 aaKnown RBP12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 HIF3AQ9Y2N7 669 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 RNF114Q9Y508 228 aa12.98□□□□□ -0.33
RPUSD3-204ENST00000424438 SOX21Q9Y651 276 aaPredicted RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms