RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 SYT3Q9BQG1 590 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 DGCR6LQ9BY27 220 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 MRPL37Q9BZE1 423 aaKnown RBP9.42□□□□□ -0.9
USP49-204ENST00000423567 MMADHCQ9H3L0 296 aaPredicted RBP9.42□□□□□ -0.9
USP49-204ENST00000423567 EGLN3Q9H6Z9 239 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 ZFAND3Q9H8U3 227 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 ELOVL3Q9HB03 270 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 RPRD1BQ9NQG5 326 aaKnown RBP9.42□□□□□ -0.9
USP49-204ENST00000423567 TBC1D23Q9NUY8 699 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 SLCO1C1Q9NYB5 712 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 REV1Q9UBZ9 1251 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 FZR1Q9UM11 496 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 BAIAP2Q9UQB8 552 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 POMPQ9Y244 141 aa9.42□□□□□ -0.9
USP49-204ENST00000423567 MAP1AP78559 2803 aaPredicted RBP9.41□□□□□ -0.9
USP49-204ENST00000423567 NDUFS8O00217 210 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 SGCEO43556 437 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 DOK2O60496 412 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 IFNGP01579 166 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 HLA-DQA2P01906 255 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 MT-ND5P03915 603 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 TP53P04637 393 aaPredicted RBP9.41□□□□□ -0.9
USP49-204ENST00000423567 HEXAP06865 529 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 COX5BP10606 129 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 GCH1P30793 250 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 HTR5AP47898 357 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 ARHGDIAP52565 204 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 CBX1P83916 185 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 COX10Q12887 443 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 SLC36A3Q495N2 470 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 SLC35F1Q5T1Q4 408 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 UGT2A3Q6UWM9 527 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.41□□□□□ -0.9
USP49-204ENST00000423567 SDR9C7Q8NEX9 313 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 OR2T33Q8NG76 320 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 OR52E2Q8NGJ4 325 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 OR1J1Q8NGS3 322 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 ABHD4Q8TB40 342 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 TEX47Q8TBZ9 253 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 SMR3AQ99954 134 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 OCSTAMPQ9BR26 566 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 PIMREGQ9BSJ6 248 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 TSSK6Q9BXA6 273 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 CADM1Q9BY67 442 aaKnown RBP9.41□□□□□ -0.9
USP49-204ENST00000423567 RACGAP1Q9H0H5 632 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 WNT5BQ9H1J7 359 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 ZNF556Q9HAH1 456 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 SRA1Q9HD15 236 aaKnown RBP9.41□□□□□ -0.9
USP49-204ENST00000423567 VNN3Q9NY84 501 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 PLEK2Q9NYT0 353 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 IL20Q9NYY1 176 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 ASH2LQ9UBL3 628 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 B9D1Q9UPM9 204 aa9.41□□□□□ -0.9
USP49-204ENST00000423567 FLNAP21333 2647 aaKnown RBP9.4□□□□□ -0.9
USP49-204ENST00000423567 LOC100509620A0A075B734 347 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 IGHV4-30-2A0A087WSY4 118 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 LOC390937A0A1W2PQ73 354 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 TCRBV3S1A0A5B6 114 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 TMEM129A0AVI4 362 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 ARRDC5A6NEK1 342 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 H3BN98 237 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 FKBP6O75344 327 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 LY6HO94772 140 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 LY6G6DO95868 133 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 ABHD16AO95870 558 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 SCG5P05408 212 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 DAOP14920 347 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 ALDH3B1P43353 468 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 KCNMB1Q16558 191 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 ZNF718Q3SXZ3 478 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 TMEM154Q6P9G4 183 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 LRP11Q86VZ4 500 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 OR6V1Q8N148 313 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 ZNF540Q8NDQ6 660 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 PROKR2Q8NFJ6 384 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 GJC3Q8NFK1 279 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 OR2AJ1Q8NGZ0 328 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 OR2T4Q8NH00 348 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 C10orf105Q8TEF2 133 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 C4orf45Q96LM5 186 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 TSSK2Q96PF2 358 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 CDADC1Q9BWV3 514 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 PLA2G12AQ9BZM1 189 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 TPK1Q9H3S4 243 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 PDP1Q9P0J1 537 aaPredicted RBP9.4□□□□□ -0.9
USP49-204ENST00000423567 TAAR3PQ9P1P4 343 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 DNAJB9Q9UBS3 223 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 KLHL21Q9UJP4 597 aa9.4□□□□□ -0.9
USP49-204ENST00000423567 IGLV1-36A0A0B4J1U3 117 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 OR6C68A6NDL8 312 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 RIIAD1A6NNX1 92 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 BHLHE40O14503 412 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 DEAF1O75398 565 aaPredicted RBP9.39□□□□□ -0.91
USP49-204ENST00000423567 CIB2O75838 187 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 MPZL1O95297 269 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 SOX14O95416 240 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 ANXA8P13928 327 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 ZNF250P15622 560 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 ZNF823P16415 610 aa9.39□□□□□ -0.91
USP49-204ENST00000423567 TUBG1P23258 451 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms