RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 FAM205BPQ63HN1 556 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 Q6ZR03 302 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 CLDN22Q8N7P3 220 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 OR2Z1Q8NG97 314 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 STON2Q8WXE9 905 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 SIGLEC11Q96RL6 698 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 SLITRK2Q9H156 845 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 IL19Q9UHD0 177 aa14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 NDRG4Q9ULP0 352 aaKnown RBP14.18□□□□□ -0.14
UPF3AP3-201ENST00000420996 C12orf71A8MTZ7 269 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 SURF4O15260 269 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 SHOX2O60902 331 aaPredicted RBP14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 PPIAL4GP0DN37 164 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 COX5BP10606 129 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 KITLGP21583 273 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 MSR1P21757 451 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 MDH2P40926 338 aaKnown RBP14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 MTNR1AP48039 350 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 CTXN1P60606 82 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 SLC9A3R2Q15599 337 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 NANOGP8Q6NSW7 305 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 C9orf139Q6ZV77 190 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 OR52E2Q8NGJ4 325 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 ITLN1Q8WWA0 313 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 WACQ9BTA9 647 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 OR5V1Q9UGF6 321 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 PPP1R3CQ9UQK1 317 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 LRCH1Q9Y2L9 728 aa14.17□□□□□ -0.14
UPF3AP3-201ENST00000420996 A0A1W2PPL8 197 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 A6NIZ1 184 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 WNT2P09544 360 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 CPT2P23786 658 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 CD80P33681 288 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 OR1E2P47887 323 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 RAP1BP61224 184 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 RAP1AP62834 184 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 LEG1Q6P5S2 330 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 MUC20Q8N307 709 aaPredicted RBP14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 HAVCR1Q96D42 359 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 CMBLQ96DG6 245 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 BPIFA2Q96DR5 249 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 THOC1Q96FV9 657 aaKnown RBP14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 POFUT1Q9H488 388 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 POLE4Q9NR33 117 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 IL20RAQ9UHF4 553 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 DOCK11Q5JSL3 2073 aa14.16□□□□□ -0.14
UPF3AP3-201ENST00000420996 CEACAM18A8MTB9 384 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 TMEM178BH3BS89 294 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 IFNL4K9M1U5 179 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 PIP5K1CO60331 668 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 IFNA14P01570 189 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 SCG5P05408 212 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 IFI30P13284 250 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 PAX2Q02962 417 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 ST3GAL3Q11203 375 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 CYLC2Q14093 348 aaPredicted RBP14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 IGFN1Q86VF2 1251 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 CALHM3Q86XJ0 350 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 PARP8Q8N3A8 854 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 LRRC75AQ8NAA5 344 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 PTP4A1Q93096 173 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 OR2V2Q96R30 315 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 SH3GL1Q99961 368 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 STARD10Q9Y365 291 aa14.15□□□□□ -0.14
UPF3AP3-201ENST00000420996 PLATP00750 562 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 IGHV4-38-2P0DP08 117 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 HTR5AP47898 357 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 SCRN3Q0VDG4 424 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 RABL3Q5HYI8 236 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 BEND6Q5SZJ8 279 aaPredicted RBP14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 C16orf87Q6PH81 154 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 LRRN1Q6UXK5 716 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 DYDC1Q8WWB3 177 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 UPRTQ96BW1 309 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 COG8Q96MW5 612 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 ECSITQ9BQ95 431 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 SSBP3Q9BWW4 388 aaPredicted RBP14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 GCM1Q9NP62 436 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 EMC7Q9NPA0 242 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 MMP24Q9Y5R2 645 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 TRRAPQ9Y4A5 3859 aa14.14□□□□□ -0.15
UPF3AP3-201ENST00000420996 IGHV3OR16-10A0A075B7F0 116 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 FBP2O00757 339 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 SGCEO43556 437 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 DOK2O60496 412 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 MDKP21741 143 aaPredicted RBP14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 MMP16P51512 607 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 FHL1Q13642 323 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 OCLNQ16625 522 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 ANKDD1AQ495B1 522 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 ERICH5Q6P6B1 374 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 BTNL3Q6UXE8 466 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 OR8J3Q8NGG0 315 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 OR51A7Q8NH64 312 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 RAB40AQ8WXH6 277 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 TAF15Q92804 592 aaKnown RBP eCLIP14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 TMIGD2Q96BF3 282 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 MAGEB18Q96M61 343 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 MIOXQ9UGB7 285 aa14.13□□□□□ -0.15
UPF3AP3-201ENST00000420996 SOX21Q9Y651 276 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms