RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 ADAP1O75689 374 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 CNOT4O95628 575 aaKnown RBP18.46■□□□□ 0.55
AP1S3-205ENST00000415298 NR2F1P10589 423 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 AK4P27144 223 aaPredicted RBP18.46■□□□□ 0.55
AP1S3-205ENST00000415298 RAB1AP62820 205 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 VAMP2P63027 116 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 OR5I1Q13606 314 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 FZD2Q14332 565 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 ATP6V1FQ16864 119 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 TNFAIP8L1Q8WVP5 186 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 DNASE2BQ8WZ79 361 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 TMEM159Q96B96 161 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 KIRREL1Q96J84 757 aa18.46■□□□□ 0.55
AP1S3-205ENST00000415298 PGRMC2O15173 223 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 SLCO2B1O94956 709 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 GASTP01350 101 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 IGHEP01854 428 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 SLC25A4P12235 298 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 APOBEC3AP31941 199 aaPredicted RBP18.45■□□□□ 0.54
AP1S3-205ENST00000415298 NOVA1P51513 510 aaKnown RBP18.45■□□□□ 0.54
AP1S3-205ENST00000415298 UBE2V2Q15819 145 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 BEX5Q5H9J7 111 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 OR1J1Q8NGS3 322 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 FAM216AQ8WUB2 273 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 SCARF2Q96GP6 870 aaPredicted RBP18.45■□□□□ 0.54
AP1S3-205ENST00000415298 HRH4Q9H3N8 390 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.45■□□□□ 0.546e-6■■■■□ 22.2
AP1S3-205ENST00000415298 MYOTQ9UBF9 498 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 APOBEC3BQ9UH17 382 aaKnown RBP18.45■□□□□ 0.54
AP1S3-205ENST00000415298 FBXO4Q9UKT5 387 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 DYRK1BQ9Y463 629 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 PI4KAP42356 2102 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 TEX13DA0A0J9YY54 714 aaPredicted RBP18.45■□□□□ 0.54
AP1S3-205ENST00000415298 TRBV11-1A0A0K0K1C0 115 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 A0A1W2PPE2 198 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 RNF222A6NCQ9 220 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 HYAL3O43820 417 aaPredicted RBP18.45■□□□□ 0.54
AP1S3-205ENST00000415298 CLDN9O95484 217 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 SP9P0CG40 484 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 PLEKHS1Q5SXH7 462 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 UBE2R2Q712K3 238 aaPredicted RBP18.45■□□□□ 0.54
AP1S3-205ENST00000415298 FAM26EQ8N5C1 309 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 ZNF485Q8NCK3 441 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 NTNG2Q96CW9 530 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 SLC41A3Q96GZ6 507 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 RGCCQ9H4X1 137 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 GPR27Q9NS67 375 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 GSKIPQ9P0R6 139 aa18.45■□□□□ 0.54
AP1S3-205ENST00000415298 ARRDC5A6NEK1 342 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 GMFGO60234 142 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 CD8AP01732 235 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 BRS3P32247 399 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 S100A3P33764 101 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 LIMS1P48059 325 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 ERVPABLB-1P60509 514 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 CSRP2Q16527 193 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 LPAL2Q16609 132 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 PMS2CLQ68D20 193 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 FBXO42Q6P3S6 717 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 ARHGEF17Q96PE2 2063 aaPredicted RBP18.44■□□□□ 0.54
AP1S3-205ENST00000415298 TMEM272A0A1B0GTI8 110 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 C9JQL5 133 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 FBXO24O75426 580 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 IFNA6P05013 189 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 CELA2BP08218 269 aaPredicted RBP18.44■□□□□ 0.54
AP1S3-205ENST00000415298 IL6RP08887 468 aaPredicted RBP18.44■□□□□ 0.54
AP1S3-205ENST00000415298 TPT1P13693 172 aaKnown RBP18.44■□□□□ 0.54
AP1S3-205ENST00000415298 OSMP13725 252 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 CD80P33681 288 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 DLSTP36957 453 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 AGTR2P50052 363 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 CRYBA2P53672 197 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 PTTG1IPP53801 180 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 GAS1P54826 345 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 SBSNQ6UWP8 590 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 MUC20Q8N307 709 aaPredicted RBP18.44■□□□□ 0.54
AP1S3-205ENST00000415298 SLC30A7Q8NEW0 376 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 KCNE5Q9UJ90 142 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 POMT1Q9Y6A1 747 aa18.44■□□□□ 0.54
AP1S3-205ENST00000415298 ZNF705GA8MUZ8 300 aaPredicted RBP18.43■□□□□ 0.54
AP1S3-205ENST00000415298 FAM157CP0CG43 387 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 CASRP41180 1078 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 IRF8Q02556 426 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 RAB40BQ12829 278 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 ZNF674Q2M3X9 581 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 MOGAT2Q3SYC2 334 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 NKAIN1Q4KMZ8 207 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 KRTCAP3Q53RY4 240 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 BEST3Q8N1M1 668 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 OR5AP2Q8NGF4 316 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 ESAMQ96AP7 390 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 FAM71F1Q96KD3 344 aaPredicted RBP18.43■□□□□ 0.54
AP1S3-205ENST00000415298 SLC25A31Q9H0C2 315 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 MRPS18AQ9NVS2 196 aaKnown RBP18.43■□□□□ 0.54
AP1S3-205ENST00000415298 LPAR3Q9UBY5 353 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 TMEM229AB2RXF0 380 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 GPR89AB7ZAQ6 455 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 PYCARD-AS1I3L0S3 204 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 EML2O95834 649 aa18.43■□□□□ 0.54
AP1S3-205ENST00000415298 GPR89BP0CG08 455 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms