RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 TCRBV21S2A2A0A5A6 115 aa8.8□□□□□ -1
CD44-206ENST00000415148 LDLRAD4O15165 306 aa8.8□□□□□ -1
CD44-206ENST00000415148 GMFGO60234 142 aa8.8□□□□□ -1
CD44-206ENST00000415148 OR2F2O95006 317 aa8.8□□□□□ -1
CD44-206ENST00000415148 PNPP00491 289 aa8.8□□□□□ -1
CD44-206ENST00000415148 IGLV3-19P01714 112 aa8.8□□□□□ -1
CD44-206ENST00000415148 IGKV3-11P04433 115 aa8.8□□□□□ -1
CD44-206ENST00000415148 ZNF735P0CB33 412 aa8.8□□□□□ -1
CD44-206ENST00000415148 THEGLP0DJG4 465 aa8.8□□□□□ -1
CD44-206ENST00000415148 GP1BBP13224 206 aa8.8□□□□□ -1
CD44-206ENST00000415148 HLA-GP17693 338 aa8.8□□□□□ -1
CD44-206ENST00000415148 RAB6AP20340 208 aa8.8□□□□□ -1
CD44-206ENST00000415148 MPZP25189 248 aa8.8□□□□□ -1
CD44-206ENST00000415148 CRABP1P29762 137 aa8.8□□□□□ -1
CD44-206ENST00000415148 FASLGP48023 281 aa8.8□□□□□ -1
CD44-206ENST00000415148 OR2F1Q13607 317 aa8.8□□□□□ -1
CD44-206ENST00000415148 STK11Q15831 433 aa8.8□□□□□ -1
CD44-206ENST00000415148 ZNF542PQ5EBM4 170 aa8.8□□□□□ -1
CD44-206ENST00000415148 C1orf100Q5SVJ3 147 aa8.8□□□□□ -1
CD44-206ENST00000415148 FAM109BQ6ICB4 259 aaPredicted RBP8.8□□□□□ -1
CD44-206ENST00000415148 TMEM88Q6PEY1 159 aa8.8□□□□□ -1
CD44-206ENST00000415148 C5orf46Q6UWT4 87 aa8.8□□□□□ -1
CD44-206ENST00000415148 TMED4Q7Z7H5 227 aa8.8□□□□□ -1
CD44-206ENST00000415148 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.8□□□□□ -1
CD44-206ENST00000415148 ZNF546Q86UE3 836 aa8.8□□□□□ -1
CD44-206ENST00000415148 PARGQ86W56 976 aa8.8□□□□□ -1
CD44-206ENST00000415148 FRMD1Q8N878 549 aa8.8□□□□□ -1
CD44-206ENST00000415148 ADOQ96SZ5 270 aa8.8□□□□□ -1
CD44-206ENST00000415148 ZNF416Q9BWM5 594 aa8.8□□□□□ -1
CD44-206ENST00000415148 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.8□□□□□ -1
CD44-206ENST00000415148 C8orf33Q9H7E9 229 aaPredicted RBP8.8□□□□□ -1
CD44-206ENST00000415148 MRPL22Q9NWU5 206 aaKnown RBP8.8□□□□□ -1
CD44-206ENST00000415148 SLC22A13Q9Y226 551 aa8.8□□□□□ -1
CD44-206ENST00000415148 PCNX3Q9H6A9 2034 aa8.8□□□□□ -1
CD44-206ENST00000415148 TRIOO75962 3097 aa8.79□□□□□ -1
CD44-206ENST00000415148 LOC390937A0A1W2PQ73 354 aa8.79□□□□□ -1
CD44-206ENST00000415148 TMEM150CB9EJG8 249 aa8.79□□□□□ -1
CD44-206ENST00000415148 ALG1L2C9J202 215 aa8.79□□□□□ -1
CD44-206ENST00000415148 TO15178 435 aa8.79□□□□□ -1
CD44-206ENST00000415148 SLC16A7O60669 478 aa8.79□□□□□ -1
CD44-206ENST00000415148 SRSF10O75494 262 aaKnown RBP8.79□□□□□ -1
CD44-206ENST00000415148 CYB5AP00167 134 aa8.79□□□□□ -1
CD44-206ENST00000415148 CAPZBP47756 277 aa8.79□□□□□ -1
CD44-206ENST00000415148 LUMP51884 338 aaPredicted RBP8.79□□□□□ -1
CD44-206ENST00000415148 POLR2HP52434 150 aaKnown RBP8.79□□□□□ -1
CD44-206ENST00000415148 MEF2DQ14814 521 aa8.79□□□□□ -1
CD44-206ENST00000415148 ACKR1Q16570 336 aa8.79□□□□□ -1
CD44-206ENST00000415148 GLYATL3Q5SZD4 288 aa8.79□□□□□ -1
CD44-206ENST00000415148 PHF19Q5T6S3 580 aa8.79□□□□□ -1
CD44-206ENST00000415148 SHEQ5VZ18 495 aa8.79□□□□□ -1
CD44-206ENST00000415148 LIN54Q6MZP7 749 aa8.79□□□□□ -1
CD44-206ENST00000415148 ADGRE4PQ86SQ3 457 aa8.79□□□□□ -1
CD44-206ENST00000415148 KCNRGQ8N5I3 272 aa8.79□□□□□ -1
CD44-206ENST00000415148 FAM160A2Q8N612 972 aaPredicted RBP8.79□□□□□ -1
CD44-206ENST00000415148 PLPP7Q8NBV4 271 aa8.79□□□□□ -1
CD44-206ENST00000415148 OR1J2Q8NGS2 313 aa8.79□□□□□ -1
CD44-206ENST00000415148 ZNF721Q8TF20 911 aa8.79□□□□□ -1
CD44-206ENST00000415148 PHYHIPLQ96FC7 376 aa8.79□□□□□ -1
CD44-206ENST00000415148 SEC22AQ96IW7 307 aa8.79□□□□□ -1
CD44-206ENST00000415148 GAS2L1Q99501 681 aaPredicted RBP8.79□□□□□ -1
CD44-206ENST00000415148 TMEM185BQ9H7F4 350 aa8.79□□□□□ -1
CD44-206ENST00000415148 PNO1Q9NRX1 252 aaKnown RBP8.79□□□□□ -1
CD44-206ENST00000415148 SLC2A8Q9NY64 477 aa8.79□□□□□ -1
CD44-206ENST00000415148 HHLA2Q9UM44 414 aa8.79□□□□□ -1
CD44-206ENST00000415148 TMEM184BQ9Y519 407 aaPredicted RBP8.79□□□□□ -1
CD44-206ENST00000415148 LILRA5A6NI73 299 aa8.79□□□□□ -1
CD44-206ENST00000415148 A8MVM7 634 aa8.79□□□□□ -1
CD44-206ENST00000415148 B4DGG1 531 aa8.79□□□□□ -1
CD44-206ENST00000415148 ZNF736B4DX44 427 aaPredicted RBP8.79□□□□□ -1
CD44-206ENST00000415148 DISC1C4P0D8 188 aa8.79□□□□□ -1
CD44-206ENST00000415148 C11orf98E9PRG8 122 aa8.79□□□□□ -1
CD44-206ENST00000415148 GPR31O00270 319 aa8.79□□□□□ -1
CD44-206ENST00000415148 HCRTR2O43614 444 aa8.79□□□□□ -1
CD44-206ENST00000415148 TSPAN2O60636 221 aa8.79□□□□□ -1
CD44-206ENST00000415148 ICOSLGO75144 302 aa8.79□□□□□ -1
CD44-206ENST00000415148 NPIPB7O75200 414 aa8.79□□□□□ -1
CD44-206ENST00000415148 SPARCP09486 303 aa8.79□□□□□ -1
CD44-206ENST00000415148 IL12BP29460 328 aa8.79□□□□□ -1
CD44-206ENST00000415148 PBX2P40425 430 aa8.79□□□□□ -1
CD44-206ENST00000415148 ADAM8P78325 824 aa8.79□□□□□ -1
CD44-206ENST00000415148 INSM1Q01101 510 aaPredicted RBP8.79□□□□□ -1
CD44-206ENST00000415148 HYAL1Q12794 435 aa8.79□□□□□ -1
CD44-206ENST00000415148 C1orf61Q13536 156 aa8.79□□□□□ -1
CD44-206ENST00000415148 EIF2B1Q14232 305 aaKnown RBP8.79□□□□□ -1
CD44-206ENST00000415148 TMEM31Q5JXX7 168 aa8.79□□□□□ -1
CD44-206ENST00000415148 OR10K2Q6IF99 312 aa8.79□□□□□ -1
CD44-206ENST00000415148 RAB12Q6IQ22 244 aa8.79□□□□□ -1
CD44-206ENST00000415148 DEGS2Q6QHC5 323 aa8.79□□□□□ -1
CD44-206ENST00000415148 ZNF704Q6ZNC4 412 aaPredicted RBP8.79□□□□□ -1
CD44-206ENST00000415148 SLC35D2Q76EJ3 337 aa8.79□□□□□ -1
CD44-206ENST00000415148 ZNF627Q7L945 461 aa8.79□□□□□ -1
CD44-206ENST00000415148 RTN4RL2Q86UN3 420 aa8.79□□□□□ -1
CD44-206ENST00000415148 BEST3Q8N1M1 668 aa8.79□□□□□ -1
CD44-206ENST00000415148 NKAIN3Q8N8D7 197 aa8.79□□□□□ -1
CD44-206ENST00000415148 ZNF321PQ8N8H1 164 aa8.79□□□□□ -1
CD44-206ENST00000415148 CLRN3Q8NCR9 226 aa8.79□□□□□ -1
CD44-206ENST00000415148 STEAP2Q8NFT2 490 aa8.79□□□□□ -1
CD44-206ENST00000415148 OR5M8Q8NGP6 311 aa8.79□□□□□ -1
CD44-206ENST00000415148 OR6S1Q8NH40 331 aa8.79□□□□□ -1
CD44-206ENST00000415148 OR52N5Q8NH56 324 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms