RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 PARD6GQ9BYG4 376 aaPredicted RBP3.54□□□□□ -1.84
BRCA1-204ENST00000412061 ADNPQ9H2P0 1102 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 KCNJ16Q9NPI9 418 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 SLC25A37Q9NYZ2 338 aa3.54□□□□□ -1.84
BRCA1-204ENST00000412061 IGLV7-46A0A075B6I9 117 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 A0A1B0GVI7 797 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 ANKRD20A5PA0PJZ0 165 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 E9PAM4 449 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 CLDN34H7C241 214 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 NME4O00746 187 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 NUPL2O15504 423 aaKnown RBP3.53□□□□□ -1.84
BRCA1-204ENST00000412061 CT45A6P0DMU7 189 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 CT45A5P0DMU8 189 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 CT45A7P0DMV0 189 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 HOXA6P31267 233 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 HOXA9P31269 272 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 GPR6P46095 362 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-204ENST00000412061 TAS2R60P59551 318 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 RPL31P62899 125 aaKnown RBP3.53□□□□□ -1.84
BRCA1-204ENST00000412061 BASP1P80723 227 aaKnown RBP3.53□□□□□ -1.84
BRCA1-204ENST00000412061 PITPNAQ00169 270 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 BCL2L1Q07817 233 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 CALCOCO2Q13137 446 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 TFDP2Q14188 446 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 BCL2A1Q16548 175 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 EXOC3L4Q17RC7 722 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 CT45A1Q5HYN5 189 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 TPTE2P1Q5T6R2 138 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 C9orf66Q5T8R8 295 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 CLEC18BQ6UXF7 455 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 DNM1P46Q6ZS02 220 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 Q6ZTC4 211 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 TMEM135Q86UB9 458 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 PPP1R27Q86WC6 154 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 WDSUB1Q8N9V3 476 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 ZNF738Q8NE65 137 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 CT45A3Q8NHU0 189 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 AGAP11Q8TF27 550 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 CHCHD10Q8WYQ3 142 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-204ENST00000412061 FGF14Q92915 247 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 TMEM54Q969K7 222 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 MCCC1Q96RQ3 725 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-204ENST00000412061 OPRPNQ99935 248 aaPredicted RBP3.53□□□□□ -1.84
BRCA1-204ENST00000412061 DCUN1D5Q9BTE7 237 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 SELENOIQ9C0D9 397 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 WDR54Q9H977 334 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 TMBIM4Q9HC24 238 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 EXD2Q9NVH0 621 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 SDHAF2Q9NX18 166 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 CALYQ9NYX4 217 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 TREM2Q9NZC2 230 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 VAPAQ9P0L0 249 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 Q9UF83 564 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 MUTYHQ9UIF7 546 aa3.53□□□□□ -1.84
BRCA1-204ENST00000412061 IGHV3-16A0A0C4DH30 117 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 A0A1B0GTI1 187 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 A8MX80 341 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ERI3O43414 337 aaKnown RBP3.52□□□□□ -1.85
BRCA1-204ENST00000412061 DPM1O60762 260 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ICOSLGO75144 302 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ALOX12BO75342 701 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 GJB5O95377 273 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 OR8U8P0C7N1 319 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 IGLL1P15814 213 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 HLA-GP17693 338 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 TCP1P17987 556 aaKnown RBP3.52□□□□□ -1.85
BRCA1-204ENST00000412061 RAB4AP20338 218 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 IL2RGP31785 369 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 GPX4P36969 197 aaPredicted RBP3.52□□□□□ -1.85
BRCA1-204ENST00000412061 KIR2DS4P43632 304 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 HCAR3P49019 387 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 KLK7P49862 253 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 OR2B8PP59922 312 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 PRPS1P60891 318 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ACVR1Q04771 509 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF726P1Q15940 193 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 COQ5Q5HYK3 327 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF506Q5JVG8 444 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ACTL10Q5JWF8 245 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 FHL5Q5TD97 284 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 CD300LGQ6UXG3 332 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 WDR82Q6UXN9 313 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 HORMAD1Q86X24 394 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 C6orf223Q8N319 242 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ARRDC1Q8N5I2 433 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 OR2Y1Q8NGV0 311 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 CCDC26Q8TAB7 109 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ZNF461Q8TAF7 563 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 IFT81Q8WYA0 676 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ARPC1AQ92747 370 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 B3GALT6Q96L58 329 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 AGMATQ9BSE5 352 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 CHCHD5Q9BSY4 110 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 OR51J1Q9H342 316 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ISYNA1Q9NPH2 558 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 TMEM9BQ9NQ34 198 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 MIEF1Q9NQG6 463 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 ARMCX1Q9P291 453 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 CYB5R1Q9UHQ9 305 aa3.52□□□□□ -1.85
BRCA1-204ENST00000412061 USP42Q9H9J4 1324 aaKnown RBP3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms