RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 ZNF43P17038 809 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 SOX2P48431 317 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 P2RY4P51582 365 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 RRAS2P62070 204 aaPredicted RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 EIF3IQ13347 325 aaKnown RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 SNTB2Q13425 540 aaKnown RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 CARTPTQ16568 116 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 ELFN2Q5R3F8 820 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 TMEM69Q5SWH9 247 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 C6orf15Q6UXA7 325 aaPredicted RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 DNM1P46Q6ZS02 220 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 LINGO2Q7L985 606 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 TMPRSS12Q86WS5 348 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 LSRQ86X29 649 aaPredicted RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 TMEM156Q8N614 296 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 OR1J4Q8NGS1 313 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 SYNPRQ8TBG9 265 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 UBASH3BQ8TF42 649 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 AKAP1Q92667 903 aaKnown RBP eCLIP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 PTX4Q96A99 478 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 SLC25A38Q96DW6 304 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 ZNF486Q96H40 463 aaPredicted RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 OR5B2Q96R09 309 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 AMELYQ99218 206 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 MESP1Q9BRJ9 268 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 HPF1Q9NWY4 346 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 CYB5R1Q9UHQ9 305 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 WASF3Q9UPY6 502 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 MRPS18CQ9Y3D5 142 aaKnown RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 ALG5Q9Y673 324 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 FREM3P0C091 2139 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 C7orf66A4D0T2 115 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 FAM172BPA6NC97 362 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 SULT2B1O00204 365 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 XRCC3O43542 346 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 PRAF2O60831 178 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 STK17BO94768 372 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 LIFP15018 202 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 ARSBP15848 533 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 IGFBP3P17936 291 aaPredicted RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 ADRA2CP18825 462 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 IL11P20809 199 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 FAUP35544 74 aaKnown RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 RIPPLY1Q0D2K3 151 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 KLF9Q13886 244 aaPredicted RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 RAB11BQ15907 218 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 ETFDHQ16134 617 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 HIST3H3Q16695 136 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 NDUFA5Q16718 116 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 H3F3CQ6NXT2 135 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 LRRC69Q6ZNQ3 347 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 ASB18Q6ZVZ8 466 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 BTN2A1Q7KYR7 527 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 DCXRQ7Z4W1 244 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 SYT9Q86SS6 491 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 OR56B4Q8NH76 319 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 ASB5Q8WWX0 329 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 PHF21AQ96BD5 680 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 UPRTQ96BW1 309 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 LIN37Q96GY3 246 aaPredicted RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 OR2M2Q96R28 347 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 PIGQQ9BRB3 760 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 CDCP1Q9H5V8 836 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 AKIRIN1Q9H9L7 192 aaPredicted RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 FBXL2Q9UKC9 423 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 OR52A1Q9UKL2 312 aa12.11□□□□□ -0.47
LIMS1-205ENST00000410093 MRPS7Q9Y2R9 242 aaKnown RBP12.11□□□□□ -0.47
LIMS1-205ENST00000410093 ACACBO00763 2458 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 LOC100289279A0A1B0GTE1 492 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 TMEM269A0A1B0GVZ9 245 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 SULT1C2O00338 296 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 TRAF3IP2O43734 574 aaPredicted RBP12.1□□□□□ -0.47
LIMS1-205ENST00000410093 LANCL1O43813 399 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 GPANK1O95872 356 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 TCRBP04435 133 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 ERP29P30040 261 aaKnown RBP12.1□□□□□ -0.47
LIMS1-205ENST00000410093 GUCA1AP43080 201 aaPredicted RBP12.1□□□□□ -0.47
LIMS1-205ENST00000410093 ZNF133P52736 654 aaPredicted RBP12.1□□□□□ -0.47
LIMS1-205ENST00000410093 H3F3AP84243 136 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 DGCR2P98153 550 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 BCL2L15Q5TBC7 163 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 OR7E24Q6IFN5 339 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 JMJD6Q6NYC1 403 aaPredicted RBP12.1□□□□□ -0.47
LIMS1-205ENST00000410093 ANKRD16Q6P6B7 361 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 SLC25A47Q6Q0C1 308 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 SIAH3Q8IW03 269 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 CDH26Q8IXH8 852 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 UBE2J2Q8N2K1 259 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 KDM8Q8N371 416 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 OR6M1Q8NGM8 313 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 OR2AJ1Q8NGZ0 328 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 KCNE4Q8WWG9 221 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 PNPLA2Q96AD5 504 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 NPAS1Q99742 590 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 CACNG6Q9BXT2 260 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 DDX28Q9NUL7 540 aaKnown RBP12.1□□□□□ -0.47
LIMS1-205ENST00000410093 MED29Q9NX70 200 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 STMN3Q9NZ72 180 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 PTTG3PQ9NZH4 202 aa12.1□□□□□ -0.47
LIMS1-205ENST00000410093 TCFL5Q9UL49 500 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms