RNA–Protein interactions for RNA: ENST00000409769.6

CLK1-203, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 1,192 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-203ENST00000409769 C9orf40Q8IXQ3 194 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 ANKFN1Q8N957 763 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 CDRT4Q8N9R6 151 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 APCDD1LQ8NCL9 501 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 CHDHQ8NE62 594 aaPredicted RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 C17orf47Q8NEP4 570 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 B3GNT7Q8NFL0 401 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 OR11G2Q8NGC1 345 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 OR8K3Q8NH51 312 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 NUBPLQ8TB37 319 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 FAM110BQ8TC76 370 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 SMAP2Q8WU79 429 aaPredicted RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 METTL21AQ8WXB1 218 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 GTF3AQ92664 365 aaKnown RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 PROX1Q92786 737 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 RAB8BQ92930 207 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 MAL2Q969L2 176 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 NCLNQ969V3 563 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 CCDC124Q96CT7 223 aaKnown RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 BTBD9Q96Q07 612 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 ZNF300Q96RE9 604 aaPredicted RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 NUDT9Q9BW91 350 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 RSPO3Q9BXY4 272 aaPredicted RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 ZNF350Q9GZX5 532 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 BCL2L10Q9HD36 194 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 PRODH2Q9UF12 536 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 KLK13Q9UKR3 277 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 ELF5Q9UKW6 265 aaPredicted RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 PPP1R3CQ9UQK1 317 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 FARSAQ9Y285 508 aaKnown RBP3.58□□□□□ -1.84
CLK1-203ENST00000409769 CLCA3PQ9Y6N3 262 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 FREM3P0C091 2139 aa3.58□□□□□ -1.84
CLK1-203ENST00000409769 MEX3AA1L020 520 aaKnown RBP3.57□□□□□ -1.84
CLK1-203ENST00000409769 TRABD2BA6NFA1 517 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 FRG2CA6NGY1 282 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 A8MUA0 341 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 NPIPB9F8W1W9 429 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 M0QX08 132 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 CXCR6O00574 342 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 KIAA0513O60268 411 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 ZNF354AO60765 605 aaPredicted RBP3.57□□□□□ -1.84
CLK1-203ENST00000409769 ENTPD5O75356 428 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 CIB2O75838 187 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 KCNK2O95069 426 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 MFN2O95140 757 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 H6PDO95479 791 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 EPPINO95925 133 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 AK1P00568 194 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 HPP00738 406 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 IGKV1D-16P01601 117 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 BCHEP06276 602 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 ALOX5P09917 674 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 UMPSP11172 480 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 ETS2P15036 469 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 TNNI3P19429 210 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 DRD5P21918 477 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 KDELR2P33947 212 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 GABRA3P34903 492 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 KRT20P35900 424 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 MAGEA2P43356 314 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 PPICP45877 212 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 CRISP3P54108 245 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 DSCR10P59022 87 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 RPS15P62841 145 aaKnown RBP3.57□□□□□ -1.84
CLK1-203ENST00000409769 PSPHP78330 225 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 RIPK1Q13546 671 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 SYPL1Q16563 259 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 HYAL4Q2M3T9 481 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 IQCCQ4KMZ1 466 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 DCST2Q5T1A1 773 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 REEP3Q6NUK4 255 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 ANGPTL8Q6UXH0 198 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 FRRS1Q6ZNA5 592 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 LRRC74BQ6ZQY2 392 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 NDUFAF7Q7L592 441 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 OLIG3Q7RTU3 272 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 DHFR2Q86XF0 187 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 SLC30A8Q8IWU4 369 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 ZNF619Q8N2I2 560 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 FAM86B1Q8N7N1 296 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 SLC37A3Q8NCC5 494 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 TNRC6AQ8NDV7 1962 aaKnown RBP3.57□□□□□ -1.84
CLK1-203ENST00000409769 FBXO30Q8TB52 745 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 M1APQ8TC57 530 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 RNF138Q8WVD3 245 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 PIK3R3Q92569 461 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 CDS1Q92903 461 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 SLCO4A1Q96BD0 722 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 TAMM41Q96BW9 452 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 C8orf44Q96CB5 159 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 NXPE2Q96DL1 559 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 VMP1Q96GC9 406 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 NSMCE2Q96MF7 247 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 TRNT1Q96Q11 434 aaKnown RBP3.57□□□□□ -1.84
CLK1-203ENST00000409769 SDF2Q99470 211 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 OR8D2Q9GZM6 311 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 NXF5Q9H1B4 397 aaKnown RBP3.57□□□□□ -1.84
CLK1-203ENST00000409769 OR10A4Q9H209 315 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 SLC38A1Q9H2H9 487 aa3.57□□□□□ -1.84
CLK1-203ENST00000409769 MED20Q9H944 212 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms