RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CNOT2Q9NZN8 540 aaKnown RBP14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 NDRG3Q9UGV2 375 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 TPRKBQ9Y3C4 175 aa14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 ANKRD17O75179 2603 aaKnown RBP14.43□□□□□ -0.1
TSPAN4-208ENST00000409531 EFCAB10A6NFE3 127 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 SLC1A7O00341 560 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 FAM20BO75063 409 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 SCG5P05408 212 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 SPARCP09486 303 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 ARR3P36575 388 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 NAA10P41227 235 aaPredicted RBP14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 ACTC1P68032 377 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 ACTA1P68133 377 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 SCRN3Q0VDG4 424 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 ENDOGQ14249 297 aaKnown RBP14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 DAZAP2Q15038 168 aaPredicted RBP14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 TSC22D1Q15714 1073 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 PCK2Q16822 640 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 HIKESHIQ53FT3 197 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 LAIR2Q6ISS4 152 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 TMEM53Q6P2H8 277 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 ZNF786Q8N393 782 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 ZNF454Q8N9F8 522 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 GJC3Q8NFK1 279 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 HSD17B8Q92506 261 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 HTRA1Q92743 480 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 S100PBPQ96BU1 408 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 DACH2Q96NX9 599 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 YTHDF1Q9BYJ9 559 aaKnown RBP14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 RNF121Q9H920 327 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 ADGRL4Q9HBW9 690 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 UBAP1Q9NZ09 502 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 CYB5R1Q9UHQ9 305 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 FBXL3Q9UKT7 428 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 TIMM10BQ9Y5J6 103 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 FBN2P35556 2912 aa14.42□□□□□ -0.1
TSPAN4-208ENST00000409531 PHYHO14832 338 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 XPNPEP2O43895 674 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 SELENOFO60613 162 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 MRPL3P09001 348 aaKnown RBP14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 OR2T7P0C7T2 308 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 CD79AP11912 226 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 PIPP12273 146 aaPredicted RBP14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 SLC15A1P46059 708 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 UGT2A3Q6UWM9 527 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 DPY19L4Q7Z388 723 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 SLC35F2Q8IXU6 374 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 ZNF540Q8NDQ6 660 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 OR2T27Q8NH04 317 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 OTOSQ8NHW6 89 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 LGALS12Q96DT0 336 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 MYCBPQ99417 103 aaPredicted RBP14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 ASH2LQ9UBL3 628 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 PSORS1C1Q9UIG5 152 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 LAMP5Q9UJQ1 280 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 EXOGQ9Y2C4 368 aaKnown RBP14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 LHFPL6Q9Y693 200 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 FAM221AA4D161 298 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 CTAG2O75638 210 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 DCKP27707 260 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 CCKARP32238 428 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 KRTAP10-9P60411 292 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 GSG1Q2KHT4 349 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 SLC18B1Q6NT16 456 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 CDC20BQ86Y33 519 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 ALDH16A1Q8IZ83 802 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 WDR31Q8NA23 367 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 IPCEF1Q8WWN9 437 aaPredicted RBP14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 MYDGFQ969H8 173 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 FBXO17Q96EF6 278 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 MRPL48Q96GC5 212 aaKnown RBP14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 LURAP1Q96LR2 239 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 C1orf198Q9H425 327 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 INPP5EQ9NRR6 644 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 ZNF224Q9NZL3 707 aa14.41□□□□□ -0.1
TSPAN4-208ENST00000409531 ZNF670-ZNF695F2Z2N8 137 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 CASKO14936 926 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 RAB36O95755 333 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 PTHP01270 115 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 HLA-HP01893 362 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 LYNP07948 512 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 ZNF32P17041 273 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 CRHBPP24387 322 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 RAB1AP62820 205 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 PLP2Q04941 152 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 EIF2B1Q14232 305 aaKnown RBP14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 PPA1Q15181 289 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 KCTD18Q6PI47 426 aaPredicted RBP14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 RHOUQ7L0Q8 258 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 DCXRQ7Z4W1 244 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 LINC00346Q8IVM7 164 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 STX19Q8N4C7 294 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 ACBD7Q8N6N7 88 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 FAM169BQ8N8A8 192 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 OR10H4Q8NGA5 316 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 OR4F15Q8NGB8 312 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 OR52N5Q8NH56 324 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 ASB17Q8WXJ9 295 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 GGHQ92820 318 aa14.4□□□□□ -0.1
TSPAN4-208ENST00000409531 MED18Q9BUE0 208 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms