RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 KLF9Q13886 244 aaPredicted RBP13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 PCOLCEQ15113 449 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 OR52I2Q8NH67 350 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 SMIM4Q8WVI0 70 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 TSEN15Q8WW01 171 aaKnown RBP13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 DPCDQ9BVM2 203 aaPredicted RBP13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 MED28Q9H204 178 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 B3GAT1Q9P2W7 334 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 NCOR1O75376 2440 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 A0A0A6YYJ9 748 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 A0A1W2PNR3 127 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 LIPT2A6NK58 231 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 NPIPA5E9PKD4 350 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 ZFAND5O76080 213 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 ONECUT2O95948 504 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 SYPP08247 313 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 CSRP1P21291 193 aaKnown RBP13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 PTH2RP49190 550 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 HSF1Q00613 529 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 MYBPHQ13203 477 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 TRIM61Q5EBN2 209 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 SLC18B1Q6NT16 456 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 FAM198BQ6UWH4 519 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 ZNF600Q6ZNG1 722 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 BIVMQ86UB2 503 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 ZNF679Q8IYX0 411 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 SLC26A10Q8NG04 563 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 OR6M1Q8NGM8 313 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 MFSD8Q8NHS3 518 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 ADAMTS14Q8WXS8 1223 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 ST8SIA2Q92186 375 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 COMMD4Q9H0A8 199 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 SLC26A1Q9H2B4 701 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 CHST11Q9NPF2 352 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 KLK11Q9UBX7 282 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 NPIPA1Q9UND3 350 aa13.58□□□□□ -0.24
SCAMP4-202ENST00000409472 A0A1W2PPL8 197 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 LAMTOR5O43504 91 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 RAMP1O60894 148 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 ACSM4P0C7M7 580 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 FGF5P12034 268 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 ANXA3P12429 323 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 APOBEC1P41238 236 aaKnown RBP13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 EFNB2P52799 333 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 BTG1P62324 171 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 ZNF169Q14929 603 aaPredicted RBP13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 TCEAL6Q6IPX3 200 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 FAAP20Q6NZ36 180 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 MAMSTRQ6ZN01 415 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 H1FNTQ75WM6 255 aaPredicted RBP13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 KRT77Q7Z794 578 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 DND1Q8IYX4 353 aaKnown RBP13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 GPR148Q8TDV2 347 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 RNF128Q8TEB7 428 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 TCEAL3Q969E4 200 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 MCHR2Q969V1 340 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 MS4A3Q96HJ5 214 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 C5orf34Q96MH7 638 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 KCNK17Q96T54 332 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 MNTQ99583 582 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 SAV1Q9H4B6 383 aaPredicted RBP13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 FOXJ3Q9UPW0 622 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 LMX1BO60663 402 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 TGM6O95932 706 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 CDK2P24941 298 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 ZNF41P51814 821 aaPredicted RBP13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 NDUFAF7Q7L592 441 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 OVCH2Q7RTZ1 564 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 WDSUB1Q8N9V3 476 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 OR5L2Q8NGL0 311 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 OR52N5Q8NH56 324 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 SPACA9Q96E40 222 aaPredicted RBP13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 C12orf57Q99622 126 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 DEFB126Q9BYW3 111 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 BEX1Q9HBH7 125 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 ZFP64Q9NPA5 681 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 HPF1Q9NWY4 346 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 RCE1Q9Y256 329 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 B3GALT1Q9Y5Z6 326 aa13.57□□□□□ -0.24
SCAMP4-202ENST00000409472 ANXA2P2A6NMY6 339 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 EIF1AYO14602 144 aaKnown RBP13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 ANXA2P07355 339 aaKnown RBP13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 ITGA5P08648 1049 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 MAPK3P27361 379 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 HAAOP46952 286 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 SUMO3P55854 103 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 BIDP55957 195 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 ROM1Q03395 351 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 GLO1Q04760 184 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 TEX30Q5JUR7 227 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 DCXRQ7Z4W1 244 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 RADILQ96JH8 1075 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 LINC00052Q96N35 136 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 NECAB3Q96P71 396 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 SERINC1Q9NRX5 453 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 PMS2P1A4D2B8 440 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 G3V3Y1 287 aa13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 ETV2O00321 342 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 NTN3O00634 580 aaPredicted RBP13.56□□□□□ -0.24
SCAMP4-202ENST00000409472 GPR171O14626 319 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms