RNA–Protein interactions for RNA: ENST00000409417.5

PDLIM2-207, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM2, Length 1,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-207ENST00000409417 SGCEO43556 437 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 MITFO75030 526 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 HLA-DQA2P01906 255 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 COX5BP10606 129 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 BMP4P12644 408 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 SPI1P17947 270 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 PCSK6P29122 969 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 GLRXP35754 106 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 PTH2RP49190 550 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 GDI2P50395 445 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 SWI5Q1ZZU3 235 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 MST1LQ2TV78 715 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 ICA1LQ8NDH6 482 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 PERPQ96FX8 193 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 ENOPH1Q9UHY7 261 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 NDRG4Q9ULP0 352 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 LHFPL6Q9Y693 200 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 B9A039 149 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 RER1O15258 196 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 SURF4O15260 269 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 PAICSP22234 425 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 RAD52P43351 418 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 RPS23P62266 143 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 PPP2R2BQ00005 443 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 EFNB3Q15768 340 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 TMEM236Q5W0B7 351 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 VASH1Q7L8A9 365 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 GJC3Q8NFK1 279 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 OR10H5Q8NGA6 315 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 OR51L1Q8NGJ5 315 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 ZNRF4Q8WWF5 429 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 TRMT61AQ96FX7 289 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 MRPL22Q9NWU5 206 aaKnown RBP17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 PLEK2Q9NYT0 353 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 TMEFF2Q9UIK5 374 aaPredicted RBP17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 KCNG2Q9UJ96 466 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 CMAHPQ9Y471 501 aa17.12■□□□□ 0.33
PDLIM2-207ENST00000409417 GPRIN2O60269 458 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 DOK2O60496 412 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 GYPBP06028 91 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 CCNOP22674 350 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 IGFBP5P24593 272 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 GGT2P36268 569 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 BLVRAP53004 296 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 UCP2P55851 309 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 ATP5J2P56134 94 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 HIST1H3AP68431 136 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 PTGES3Q15185 160 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 HIST2H3PS2Q5TEC6 136 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 HIST2H3AQ71DI3 136 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 PTP4A1Q93096 173 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 RBM4BQ9BQ04 359 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 CDADC1Q9BWV3 514 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 CACNG6Q9BXT2 260 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 BCL2L14Q9BZR8 327 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 EIF3KQ9UBQ5 218 aaKnown RBP17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 CYB5R1Q9UHQ9 305 aa17.11■□□□□ 0.33
PDLIM2-207ENST00000409417 HIVEP1P15822 2718 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 OR6C6A6NF89 314 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 FAM183AA6NL82 134 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 SYNGR3O43761 229 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 ICMTO60725 284 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 FAM157BP0CG42 384 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 CLUP10909 449 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 FMO3P31513 532 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 CDKN1AP38936 164 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 HTR5AP47898 357 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 CCDC92Q53HC0 331 aaPredicted RBP17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 SLC18B1Q6NT16 456 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 UNQ6126/PRO20091Q6UXV3 157 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 OR1F12Q8NHA8 337 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 PLEKHA8Q96JA3 519 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 CIB1Q99828 191 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 HCAR1Q9BXC0 346 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 PLK3Q9H4B4 646 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 MED20Q9H944 212 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 ATPIF1Q9UII2 106 aa17.1■□□□□ 0.33
PDLIM2-207ENST00000409417 PRR23D1E9PI22 279 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 H7C417 338 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 PRR23D2P0DMB1 279 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 ZNF823P16415 610 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 EPHA2P29317 976 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 WNT5AP41221 380 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 SNRPD2P62316 118 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 RAB35Q15286 201 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 SNAPC1Q16533 368 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 MSMPQ1L6U9 139 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 SHEQ5VZ18 495 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 CORO6Q6QEF8 472 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 PRSS57Q6UWY2 283 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 OR6K6Q8NGW6 343 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 OR2AJ1Q8NGZ0 328 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 STMN2Q93045 179 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 MRPL24Q96A35 216 aaKnown RBP17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 OTULINQ96BN8 352 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 FBXO9Q9UK97 447 aaPredicted RBP17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 PMF1-BGLAPU3KQ54 211 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 F8P00451 2351 aa17.09■□□□□ 0.33
PDLIM2-207ENST00000409417 TVP23AA6NH52 213 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms