RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 C10orf128Q5T292 105 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 FAM27BQ5VT28 67 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 OLFML2AQ68BL7 652 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 NHLRC1Q6VVB1 395 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 BCL6BQ8N143 479 aaPredicted RBP6.52□□□□□ -1.37
LSM5-202ENST00000409292 TMEM86BQ8N661 226 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 ZNF283Q8N7M2 679 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 ATG16L2Q8NAA4 619 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 SMYD1Q8NB12 490 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 OR8B3Q8NGG8 313 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 OR5L1Q8NGL2 311 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 TBC1D15Q8TC07 691 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 ADAMTS16Q8TE57 1224 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 RAB40AQ8WXH6 277 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 NSMAFQ92636 917 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 UPRTQ96BW1 309 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 SPDL1Q96EA4 605 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 SGTBQ96EQ0 304 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 NEIL1Q96FI4 390 aaPredicted RBP6.52□□□□□ -1.37
LSM5-202ENST00000409292 POM121L2Q96KW2 1035 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 C4orf45Q96LM5 186 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 DMRTB1Q96MA1 342 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 OR8B2Q96RD0 313 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 PKP2Q99959 881 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 C1QTNF5Q9BXJ0 243 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 RABEP2Q9H5N1 569 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 MSL2Q9HCI7 577 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 NPHS2Q9NP85 383 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 MMP26Q9NRE1 261 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 SLC7A7Q9UM01 511 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 TENM1Q9UKZ4 2725 aa6.52□□□□□ -1.37
LSM5-202ENST00000409292 IGHV3OR16-10A0A075B7F0 116 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 TRAV40A0A0B4J280 105 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 A0A1W2PPL8 197 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 CLPSL1A2RUU4 121 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 BTBD17A6NE02 478 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 A6NIZ1 184 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 NPIPB13A6NJU9 1138 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 SRRM5B3KS81 715 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 NPIPB4C9JG80 1138 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 TRAPPC2LH3BP13 241 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 M0QX08 132 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 M0R3H8 397 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 HOXA3O43365 443 aaPredicted RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 TRMUO75648 421 aaKnown RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 NDUFA7O95182 113 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 IFNA14P01570 189 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 CST2P09228 141 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 ASAH2BP0C7U1 165 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 MSR1P21757 451 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 RBM34P42696 430 aaKnown RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 TAS2R41P59536 307 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 RAP1BP61224 184 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 RAP1AP62834 184 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 ERVK-25P63136 954 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 PSG4Q00888 419 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 GUCY1A3Q02108 690 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 PAX8Q06710 450 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 RPL18Q07020 188 aaKnown RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 CDK5R2Q13319 367 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 KCNJ8Q15842 424 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 HIST3H3Q16695 136 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 KLF17Q5JT82 389 aaPredicted RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 LRIF1Q5T3J3 769 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 CD276Q5ZPR3 534 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 FIP1L1Q6UN15 594 aaKnown RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 LSRQ86X29 649 aaPredicted RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 ZNF101Q8IZC7 436 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 KIR3DL3Q8N743 410 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 OR10S1Q8NGN2 331 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 OR9I1Q8NGQ6 314 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 OR11L1Q8NGX0 322 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 AKR7LQ8NHP1 331 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 ASB10Q8WXI3 467 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 LRTOMTQ8WZ04 291 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 GTF3AQ92664 365 aaKnown RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 MAELQ96JY0 434 aaKnown RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 ARHGDIGQ99819 225 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 ALG12Q9BV10 488 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 MRPL13Q9BYD1 178 aaKnown RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 OR2H1Q9GZK4 316 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 POLR2J2Q9GZM3 115 aaKnown RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 POLR2J3Q9H1A7 115 aaKnown RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 TBCCD1Q9NVR7 557 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 ARMCX1Q9P291 453 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 CLN8Q9UBY8 286 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 CAB39Q9Y376 341 aaPredicted RBP6.51□□□□□ -1.37
LSM5-202ENST00000409292 RNF114Q9Y508 228 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 POMT1Q9Y6A1 747 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 USH1CQ9Y6N9 552 aa6.51□□□□□ -1.37
LSM5-202ENST00000409292 IGHV2-70DA0A0C4DH43 119 aa6.5□□□□□ -1.37
LSM5-202ENST00000409292 CEACAM18A8MTB9 384 aa6.5□□□□□ -1.37
LSM5-202ENST00000409292 TMEM178BH3BS89 294 aa6.5□□□□□ -1.37
LSM5-202ENST00000409292 ANGPT2O15123 496 aa6.5□□□□□ -1.37
LSM5-202ENST00000409292 ENSAO43768 121 aaKnown RBP6.5□□□□□ -1.37
LSM5-202ENST00000409292 SNNO75324 88 aaPredicted RBP6.5□□□□□ -1.37
LSM5-202ENST00000409292 OR7A10O76100 309 aa6.5□□□□□ -1.37
LSM5-202ENST00000409292 SLC2A10O95528 541 aa6.5□□□□□ -1.37
LSM5-202ENST00000409292 NGFP01138 241 aa6.5□□□□□ -1.37
LSM5-202ENST00000409292 MT-ND1P03886 318 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms