RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 HDDC2Q7Z4H3 204 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 MSRB3Q8IXL7 192 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 TBC1D15Q8TC07 691 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 CMBLQ96DG6 245 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 CDADC1Q9BWV3 514 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 EVA1AQ9H8M9 152 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 SDR39U1Q9NRG7 319 aaPredicted RBP13.89□□□□□ -0.19
CHMP3-203ENST00000409225 SLC25A37Q9NYZ2 338 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 SLC7A7Q9UM01 511 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 TIMM10BQ9Y5J6 103 aa13.89□□□□□ -0.19
CHMP3-203ENST00000409225 DOCK11Q5JSL3 2073 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 TNFRSF13BO14836 293 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-203ENST00000409225 IGHV4-59P01825 116 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 SFTPBP07988 381 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 KITLGP21583 273 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 SLC6A2P23975 617 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 ERFP50548 548 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 DAP3P51398 398 aaKnown RBP13.88□□□□□ -0.19
CHMP3-203ENST00000409225 FAM189A2Q15884 450 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 FAM27BQ5VT28 67 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 NLRC3Q7RTR2 1065 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 ATG16L2Q8NAA4 619 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 NPEPL1Q8NDH3 523 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 OR6T1Q8NGN1 323 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 VANGL1Q8TAA9 524 aaPredicted RBP13.88□□□□□ -0.19
CHMP3-203ENST00000409225 HDAC2Q92769 488 aaKnown RBP13.88□□□□□ -0.19
CHMP3-203ENST00000409225 PAIP2Q9BPZ3 127 aaKnown RBP13.88□□□□□ -0.19
CHMP3-203ENST00000409225 INIPQ9NRY2 104 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 CLN8Q9UBY8 286 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 ANGPT4Q9Y264 503 aa13.88□□□□□ -0.19
CHMP3-203ENST00000409225 IGHV3-64DA0A0J9YX35 117 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 C5orf63A6NC05 138 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 IFNL4K9M1U5 179 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 PIP5K1CO60331 668 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 OPN1SWP03999 348 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 CST2P09228 141 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 AQP2P41181 271 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 FAM201AQ5SY85 155 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 SLC25A47Q6Q0C1 308 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 Q6ZSV7 163 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 RBM45Q8IUH3 476 aaKnown RBP13.87□□□□□ -0.19
CHMP3-203ENST00000409225 OR5AS1Q8N127 324 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 OR10AD1Q8NGE0 317 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 ADAMTS16Q8TE57 1224 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 NMD3Q96D46 503 aaKnown RBP13.87□□□□□ -0.19
CHMP3-203ENST00000409225 SMURF2Q9HAU4 748 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 SLAMF8Q9P0V8 285 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 KIF17Q9P2E2 1029 aa13.87□□□□□ -0.19
CHMP3-203ENST00000409225 TRAPPC13A5PLN9 417 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 C22orf46C9J442 243 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 UBDO15205 165 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 ENSAO43768 121 aaKnown RBP13.86□□□□□ -0.19
CHMP3-203ENST00000409225 CFHR2P36980 270 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 PCBD1P61457 104 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 ZNF404Q494X3 552 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 ARMC4Q5T2S8 1044 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 KPRPQ5T749 579 aaPredicted RBP13.86□□□□□ -0.19
CHMP3-203ENST00000409225 SAMD5Q5TGI4 173 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 WDR25Q64LD2 544 aaPredicted RBP13.86□□□□□ -0.19
CHMP3-203ENST00000409225 LYPD2Q6UXB3 125 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 TSPYL5Q86VY4 417 aaPredicted RBP13.86□□□□□ -0.19
CHMP3-203ENST00000409225 OR4D11Q8NGI4 311 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 MOSPD2Q8NHP6 518 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 MRAPQ8TCY5 172 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 GATAD2BQ8WXI9 593 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHMP3-203ENST00000409225 MEGF10Q96KG7 1140 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 MAGEB18Q96M61 343 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 TMEM38AQ9H6F2 299 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 MEPEQ9NQ76 525 aaPredicted RBP13.86□□□□□ -0.19
CHMP3-203ENST00000409225 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.86□□□□□ -0.19
CHMP3-203ENST00000409225 STX18Q9P2W9 335 aaKnown RBP13.86□□□□□ -0.19
CHMP3-203ENST00000409225 NDRG4Q9ULP0 352 aaKnown RBP13.86□□□□□ -0.19
CHMP3-203ENST00000409225 STARD10Q9Y365 291 aa13.86□□□□□ -0.19
CHMP3-203ENST00000409225 CENPVL3A0A0U1RRI6 287 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 A0A1W2PPL8 197 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 P2RY10O00398 339 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 TOP3AQ13472 1001 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-203ENST00000409225 MPP2Q14168 576 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 DUSP7Q16829 419 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 LRIF1Q5T3J3 769 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 C1orf94Q6P1W5 598 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 REC114Q7Z4M0 266 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 MOGAT3Q86VF5 341 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 CLDN22Q8N7P3 220 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 ZSCAN4Q8NAM6 433 aaPredicted RBP13.85□□□□□ -0.19
CHMP3-203ENST00000409225 GPR32P1Q8NGA4 272 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 PFN4Q8NHR9 129 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 C10orf82Q8WW14 230 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 HAVCR1Q96D42 359 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 MPP4Q96JB8 637 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 MAELQ96JY0 434 aaKnown RBP13.85□□□□□ -0.19
CHMP3-203ENST00000409225 OR52B2Q96RD2 323 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 TBX15Q96SF7 602 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 ZNF426Q9BUY5 554 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 IKZF5Q9H5V7 419 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 KCNK9Q9NPC2 374 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 ACOXLQ9NUZ1 547 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 TBCCD1Q9NVR7 557 aa13.85□□□□□ -0.19
CHMP3-203ENST00000409225 DNAH3Q8TD57 4116 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms