RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 DEFB113Q30KQ7 82 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 RFX4Q33E94 735 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SLC25A53Q5H9E4 307 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 RAB12Q6IQ22 244 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SLC16A13Q7RTY0 426 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 ATG4DQ86TL0 474 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 RDH10Q8IZV5 341 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 DHRSXQ8N5I4 330 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 NANOGP1Q8N7R0 232 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 RNF166Q96A37 237 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 PANX1Q96RD7 426 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SOX7Q9BT81 388 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 MRPL37Q9BZE1 423 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 GSX2Q9BZM3 304 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 LAT2Q9GZY6 243 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 ELOVL5Q9NYP7 299 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 DNAJB9Q9UBS3 223 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 NUFIP1Q9UHK0 495 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 WDR45Q9Y484 360 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 NUBP2Q9Y5Y2 271 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 A0A0U1RQV5 110 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 ACOT8O14734 319 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SMAD9O15198 467 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 TXNL1O43396 289 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SELENOFO60613 162 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 GCM2O75603 506 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 AK1P00568 194 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 ALPLP05186 524 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 PAICSP22234 425 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 FPR3P25089 353 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 ADH6P28332 368 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 RYKP34925 604 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 PCGF2P35227 344 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 POLR2IP36954 125 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 KHKP50053 298 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 RBP2P50120 134 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 MVDP53602 400 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 HNF4GQ14541 408 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 ZNF621Q6ZSS3 439 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 EIF3MQ7L2H7 374 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 FCRLAQ7L513 359 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SPATA19Q7Z5L4 167 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 CXorf67Q86X51 503 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 TGIF2LYQ8IUE0 185 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 PGAM4Q8N0Y7 254 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 C10orf53Q8N6V4 93 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 CNOT9Q92600 299 aaKnown RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 MBD6Q96DN6 1003 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 AURKBQ96GD4 344 aaPredicted RBP8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 C14orf144Q96I85 54 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 MRGPRX4Q96LA9 322 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 OR52E6Q96RD3 313 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 CCDC90BQ9GZT6 254 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SAP130Q9H0E3 1048 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SLC38A1Q9H2H9 487 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 TOR3AQ9H497 397 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 UBTD1Q9HAC8 227 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 CTPS2Q9NRF8 586 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 KLHL13Q9P2N7 655 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 SSR3Q9UNL2 185 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 ALG5Q9Y673 324 aa8.56□□□□□ -1.04
NIF3L1-202ENST00000409020 FREM1Q5H8C1 2179 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 ZNF99A8MXY4 864 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 ZNF814B7Z6K7 855 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 J3KRW8 73 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 KLF4O43474 513 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 PRKYO43930 277 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 MED6O75586 246 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 PLAUP00749 431 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 CD99P14209 185 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 PAX6P26367 422 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 DPY19L1Q2PZI1 675 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 HSD17B13Q7Z5P4 300 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 GABRG1Q8N1C3 465 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 PARP16Q8N5Y8 322 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 S100PBPQ96BU1 408 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 OR5B2Q96R09 309 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 ZNF300Q96RE9 604 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 OR11A1Q9GZK7 315 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 ACTR6Q9GZN1 396 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 GSX1Q9H4S2 264 aaPredicted RBP8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 HHATLQ9HCP6 504 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 DLL4Q9NR61 685 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 RLIMQ9NVW2 624 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 ZNF226Q9NYT6 803 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 TMEM181Q9P2C4 612 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 ING4Q9UNL4 249 aa8.55□□□□□ -1.04
NIF3L1-202ENST00000409020 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 FAM234BA2RU67 622 aa8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 H7C1Q1 480 aa8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 UBE2CO00762 179 aa8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 DLGAP1O14490 977 aa8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 MRPS14O60783 128 aaKnown RBP8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 RAMP1O60894 148 aa8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 TMEM127O75204 238 aa8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 SLC22A3O75751 556 aa8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 ETFAP13804 333 aa8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 NTF4P34130 210 aa8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 CEACAM6P40199 344 aa8.54□□□□□ -1.04
NIF3L1-202ENST00000409020 SHFQ7M4L6 423 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms