RNA–Protein interactions for RNA: ENST00000407977.6

RNF43-201, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RNF43, Length 5,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-201ENST00000407977 ARG2P78540 354 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 ZNF90Q03938 601 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 DUSP5Q16690 384 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 PAQR6Q6TCH4 344 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 SHISA6Q6ZSJ9 500 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 ZFPM2Q8WW38 1151 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 TOE1Q96GM8 510 aaKnown RBP11.86□□□□□ -0.51
RNF43-201ENST00000407977 WWTR1Q9GZV5 400 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 OR51B6Q9H340 312 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 A0A1B0GTW7 788 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 B4GALT3O60512 393 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 GSTP1P09211 210 aaKnown RBP11.86□□□□□ -0.51
RNF43-201ENST00000407977 ITGB8P26012 769 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 C17orf99Q6UX52 265 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 STT3BQ8TCJ2 826 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 GPX8Q8TED1 209 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 PIGTQ969N2 578 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 TOLLIPQ9H0E2 274 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 KCNG2Q9UJ96 466 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 RPH3ALQ9UNE2 315 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 COA3Q9Y2R0 106 aaPredicted RBP11.86□□□□□ -0.51
RNF43-201ENST00000407977 PDE4DIPQ5VU43 2346 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 KDM3BQ7LBC6 1761 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 PTAFRP25105 342 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 IL3RAP26951 378 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 SSR4P51571 173 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 SMAD2Q15796 467 aaKnown RBP11.86□□□□□ -0.51
RNF43-201ENST00000407977 H2BFWTQ7Z2G1 175 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 EXD3Q8N9H8 876 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 EDAQ92838 391 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 ARRDC3Q96B67 414 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 MUCL1Q96DR8 90 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 ATF6BQ99941 703 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 ZNF2Q9BSG1 426 aaPredicted RBP11.86□□□□□ -0.51
RNF43-201ENST00000407977 SLIRPQ9GZT3 109 aaKnown RBP11.86□□□□□ -0.51
RNF43-201ENST00000407977 SLC35D1Q9NTN3 355 aa11.86□□□□□ -0.51
RNF43-201ENST00000407977 RFPL4AA6NLU0 287 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 RFPL4AL1F8VTS6 287 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 EDIL3O43854 480 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 LIM2P55344 173 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 TAS2R45P59539 299 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 TIGITQ495A1 244 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 GRAMD2AQ8IUY3 354 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 LMNTD1Q8N9Z9 388 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 CHRDL1Q9BU40 450 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 CYSLTR2Q9NS75 346 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 MYH1P12882 1939 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 MYH4Q9Y623 1939 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 SUB1P53999 127 aaKnown RBP eCLIP11.85□□□□□ -0.51
RNF43-201ENST00000407977 OR8G2PQ6IF36 304 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 AMIGO3Q86WK7 504 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 DTWD2Q8NBA8 298 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 RELL2Q8NC24 303 aaPredicted RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 LHX4Q969G2 390 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 TVP23CQ96ET8 276 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 MAP6Q96JE9 813 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 OR2A14Q96R47 310 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 FAM96BQ9Y3D0 163 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 TIMP1P01033 207 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 CD46P15529 392 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 FGF9P31371 208 aaPredicted RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 DHODHQ02127 395 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 AFMIDQ63HM1 303 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 ARIH2OSQ8N7S6 290 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 MS4A6EQ96DS6 147 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 ZNF891A8MT65 544 aaPredicted RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 TARM1B6A8C7 271 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 XRCC3O43542 346 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 ELLP55199 621 aaPredicted RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 HAGHQ16775 308 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 RNF151Q2KHN1 245 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 ZNF813Q6ZN06 617 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 MRPL43Q8N983 215 aaKnown RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 OR5AP2Q8NGF4 316 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 PRR14Q9BWN1 585 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 OPA3Q9H6K4 179 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 CREBZFQ9NS37 354 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 ZIC2O95409 532 aaPredicted RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 OR10J4P0C629 311 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 HIST1H1CP16403 213 aaKnown RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 CST5P28325 142 aaPredicted RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 ARRB2P32121 409 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 OR10A3P58181 314 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 UBE2G1P62253 170 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 MAT1AQ00266 395 aaKnown RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 ACOT6Q3I5F7 207 aaPredicted RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 PDZD11Q5EBL8 140 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 COL13A1Q5TAT6 717 aaPredicted RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 METRNLQ641Q3 311 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 ZNF626Q68DY1 528 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 STAC2Q6ZMT1 411 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 TMEM229BQ8NBD8 167 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 OR13D1Q8NGV5 346 aa11.85□□□□□ -0.51
RNF43-201ENST00000407977 MRPL38Q96DV4 380 aaKnown RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 CIB3Q96Q77 187 aaPredicted RBP11.85□□□□□ -0.51
RNF43-201ENST00000407977 G3V3Q6 166 aa11.84□□□□□ -0.51
RNF43-201ENST00000407977 CD3DP04234 171 aa11.84□□□□□ -0.51
RNF43-201ENST00000407977 EPXP11678 715 aa11.84□□□□□ -0.51
RNF43-201ENST00000407977 RPL34P49207 117 aaKnown RBP11.84□□□□□ -0.51
RNF43-201ENST00000407977 EEF1A2Q05639 463 aaKnown RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms