RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 PDZK1IP1Q13113 114 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 DEFB110Q30KQ9 67 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 AVPI1Q5T686 147 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 OR52W1Q6IF63 320 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 MDGA2Q7Z553 956 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 SLC25A42Q86VD7 318 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 GVQW1Q8N7I0 195 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 BCORP1Q8N888 145 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 ADAD2Q8NCV1 583 aaKnown RBP12.59□□□□□ -0.39
APOB-202ENST00000399256 OTOSQ8NHW6 89 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 ELP5Q8TE02 316 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 SFT2D1Q8WV19 159 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 MRGPRFQ96AM1 343 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 ZNF524Q96C55 264 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 FOXRED1Q96CU9 486 aaPredicted RBP12.59□□□□□ -0.39
APOB-202ENST00000399256 KXD1Q9BQD3 176 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 SEMA6CQ9H3T2 930 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 CERS4Q9HA82 394 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 ZFP57Q9NU63 452 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 EDARQ9UNE0 448 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 TMEM14AQ9Y6G1 99 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 C11orf98E9PRG8 122 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 H0Y8X5 98 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 SNAPINO95295 136 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 S100A12P80511 92 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 EGR4Q05215 589 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 ERV3-1Q14264 604 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 SLC17A1Q14916 467 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 CD226Q15762 336 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 SWI5Q1ZZU3 235 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 RNASE10Q5GAN6 216 aaKnown RBP12.59□□□□□ -0.39
APOB-202ENST00000399256 EEF1A1P5Q5VTE0 462 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 POMZP3Q6PJE2 187 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 CBLN3Q6UW01 205 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 TMPPEQ6ZT21 453 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 CMBLQ96DG6 245 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 OR8B4Q96RC9 309 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 PHB2Q99623 299 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 KLHDC3Q9BQ90 382 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 GDE1Q9NZC3 331 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 CARHSP1Q9Y2V2 147 aaKnown RBP12.59□□□□□ -0.39
APOB-202ENST00000399256 TRANK1O15050 2925 aa12.59□□□□□ -0.39
APOB-202ENST00000399256 ARID1BQ8NFD5 2236 aaPredicted RBP12.58□□□□□ -0.4
APOB-202ENST00000399256 TBC1D3DA0A087WVF3 549 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 ZNF705EA8MWA4 302 aaPredicted RBP12.58□□□□□ -0.4
APOB-202ENST00000399256 TBC1D3LB9A6J9 549 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 EIF3GO75821 320 aaKnown RBP eCLIP12.58□□□□□ -0.4
APOB-202ENST00000399256 PLGP00747 810 aaPredicted RBP12.58□□□□□ -0.4
APOB-202ENST00000399256 SPARCP09486 303 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 TBC1D3HP0C7X1 549 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 TPT1P13693 172 aaKnown RBP12.58□□□□□ -0.4
APOB-202ENST00000399256 C5AR1P21730 350 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 NKAPLQ5M9Q1 402 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 TBC1D3CQ6IPX1 549 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 ATG4DQ86TL0 474 aaPredicted RBP12.58□□□□□ -0.4
APOB-202ENST00000399256 TBC1D3Q8IZP1 549 aaPredicted RBP12.58□□□□□ -0.4
APOB-202ENST00000399256 OR4K17Q8NGC6 315 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 OR10R2Q8NGX6 335 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 G6PC3Q9BUM1 346 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 CKLFQ9UBR5 152 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 APBB3O95704 486 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 ASAH2BP0C7U1 165 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 CT45A8P0DMV1 189 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 CT45A9P0DMV2 189 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 APEHP13798 732 aaKnown RBP12.58□□□□□ -0.4
APOB-202ENST00000399256 RAB38P57729 211 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 AIMP2Q13155 320 aaKnown RBP12.58□□□□□ -0.4
APOB-202ENST00000399256 CT45A2Q5DJT8 189 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 C10orf91Q5T1B1 145 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 ADGRE4PQ86SQ3 457 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 NANPQ8TBE9 248 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 MITD1Q8WV92 249 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 ASB5Q8WWX0 329 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 PATE1Q8WXA2 126 aa12.58□□□□□ -0.4
APOB-202ENST00000399256 SLC25A44Q96H78 314 aaPredicted RBP12.58□□□□□ -0.4
APOB-202ENST00000399256 CHMP1AQ9HD42 196 aaPredicted RBP12.58□□□□□ -0.4
APOB-202ENST00000399256 MEX3AA1L020 520 aaKnown RBP12.57□□□□□ -0.4
APOB-202ENST00000399256 HNRNPA1P09651 372 aaKnown RBP eCLIP12.57□□□□□ -0.42e-8■■■■□ 19.6
APOB-202ENST00000399256 CD79AP11912 226 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 SEC13P55735 322 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 EIF2B1Q14232 305 aaKnown RBP12.57□□□□□ -0.4
APOB-202ENST00000399256 WBP2NLQ6ICG8 309 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 TMEM184AQ6ZMB5 413 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 RTL10Q7L3V2 364 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 TRAPPC6BQ86SZ2 158 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 FJX1Q86VR8 437 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 PHOSPHO1Q8TCT1 267 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 CCDC3Q9BQI4 270 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 NKX2-4Q9H2Z4 354 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 B9D1Q9UPM9 204 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 UNC80Q8N2C7 3258 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 TXNDC12O95881 172 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 ADH1BP00325 375 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 ERCC1P07992 297 aaPredicted RBP12.57□□□□□ -0.4
APOB-202ENST00000399256 PPP1CAP62136 330 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 TOMM20Q15388 145 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 KLHL26Q53HC5 615 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 BAP18Q8IXM2 172 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 PRRT1Q99946 306 aa12.57□□□□□ -0.4
APOB-202ENST00000399256 SLCO5A1Q9H2Y9 848 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms