RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 HIST1H3AP68431 136 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 TP53I3Q53FA7 332 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 HIST2H3PS2Q5TEC6 136 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 FOXB2Q5VYV0 432 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 KLHL24Q6TFL4 600 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 HIST2H3AQ71DI3 136 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 CD163Q86VB7 1156 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 SLC22A24Q8N4F4 322 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 C12orf43Q96C57 262 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 SLAMF6Q96DU3 332 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 ZNF416Q9BWM5 594 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 SFXN3Q9BWM7 321 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 HDHD2Q9H0R4 259 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 PLSCR4Q9NRQ2 329 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 DDX28Q9NUL7 540 aaKnown RBP16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 ASH2LQ9UBL3 628 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 LHFPL6Q9Y693 200 aa16.75■□□□□ 0.27
TSPAN4-204ENST00000397404 TRDV1A0A1B0GX56 115 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 MPZL1O95297 269 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 GPANK1O95872 356 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 H2BFMP0C1H6 154 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 CTSSP25774 331 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 MMP16P51512 607 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 CTF1Q16619 201 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 SLC36A2Q495M3 483 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 YIF1BQ5BJH7 314 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 SLC16A12Q6ZSM3 486 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 Q6ZT83 130 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 UBE2J2Q8N2K1 259 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 KBTBD8Q8NFY9 601 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 NANOS1Q8WY41 292 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 COMMD4Q9H0A8 199 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 SP140LQ9H930 580 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 ELOVL3Q9HB03 270 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 MOV10Q9HCE1 1003 aaKnown RBP16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 ACOXLQ9NUZ1 547 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 TIMM10BQ9Y5J6 103 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 PIEZO2Q9H5I5 2752 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 GTF3C1Q12789 2109 aa16.74■□□□□ 0.27
TSPAN4-204ENST00000397404 TRBV2A0A0J9YWF9 115 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 IL18BPO95998 194 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 CD8BP10966 210 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 CDAP32320 146 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 UGT2B10P36537 528 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 CASP6P55212 293 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 ALKBH1Q13686 389 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 RPTNQ6XPR3 784 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 ZNF813Q6ZN06 617 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 USP43Q70EL4 1123 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 NUFIP2Q7Z417 695 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 RFLNBQ8N5W9 214 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 C9orf106Q8NAJ2 232 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 C1orf162Q8NEQ5 155 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 PTTG2Q9NZH5 202 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 LUZP4Q9P127 313 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 ST6GALNAC2Q9UJ37 374 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 CLEC4AQ9UMR7 237 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 KLHDC2Q9Y2U9 406 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 SF3B6Q9Y3B4 125 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 SLC19A2O60779 497 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 GATBO75879 557 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 LALBAP00709 142 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 EDNRAP25101 427 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 MAPK3P27361 379 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 CEACAM8P31997 349 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 CD79BP40259 229 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 ENDOGQ14249 297 aaKnown RBP16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 ANKRD16Q6P6B7 361 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 TFAP2EQ6VUC0 442 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 SLC16A14Q7RTX9 510 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 ST6GALNAC3Q8NDV1 305 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 SMAP2Q8WU79 429 aaPredicted RBP16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 ITFG2Q969R8 447 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 FOXN4Q96NZ1 517 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 EMC7Q9NPA0 242 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 ASF1BQ9NVP2 202 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 SLCO1C1Q9NYB5 712 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 FBXL3Q9UKT7 428 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 ZNF281Q9Y2X9 895 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 LRP12Q9Y561 859 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 R4GMQ9 66 aa16.73■□□□□ 0.27
TSPAN4-204ENST00000397404 SPTA1P02549 2419 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 TTLL8A6PVC2 850 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 TMIGD3P0DMS9 266 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 GADD45AP24522 165 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 HSD11B1P28845 292 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 ARR3P36575 388 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 CRYBB2P43320 205 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 KIR2DL2P43627 348 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 GDI2P50395 445 aaKnown RBP16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 DBPQ10586 325 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 P2RY6Q15077 328 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 RAB35Q15286 201 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 TAF13Q15543 124 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 ELFN2Q5R3F8 820 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 TMEM211Q6ICI0 200 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 LRRN1Q6UXK5 716 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 BEND4Q6ZU67 534 aa16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.72■□□□□ 0.27
TSPAN4-204ENST00000397404 OR2G2Q8NGZ5 317 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms