RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 FAM171A2A8MVW0 826 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 AHRRA9YTQ3 701 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 ZNF814B7Z6K7 855 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 C11orf98E9PRG8 122 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 PHYHO14832 338 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 SMAD9O15198 467 aaKnown RBP13.21□□□□□ -0.29
CAPN3-207ENST00000397200 ARHGEF9O43307 516 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 ARL6IP5O75915 188 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 AHCYP23526 432 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 EDNRAP25101 427 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 AZGP1P25311 298 aaKnown RBP13.21□□□□□ -0.29
CAPN3-207ENST00000397200 BLVRAP53004 296 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 EGR3Q06889 387 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 PUDPQ08623 228 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 ASAH1Q13510 395 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 TMEM225Q6GV28 225 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 FCRLAQ7L513 359 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 CD163Q86VB7 1156 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 ROBO4Q8WZ75 1007 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 HTRA1Q92743 480 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 PRRG4Q9BZD6 226 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 MRM2Q9UI43 246 aaKnown RBP13.21□□□□□ -0.29
CAPN3-207ENST00000397200 TMEM14AQ9Y6G1 99 aa13.21□□□□□ -0.29
CAPN3-207ENST00000397200 FIGNL2A6NMB9 653 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 MS4A18H0YCH9 400 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 XKRYO14609 159 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 WDR1O75083 606 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 VAMP5O95183 116 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 TACSTD2P09758 323 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 GABRA1P14867 456 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 KLK2P20151 261 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 ALOX5APP20292 161 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 RANBP1P43487 201 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 P2RY4P51582 365 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 NANOS3P60323 173 aaKnown RBP13.21□□□□□ -0.3
CAPN3-207ENST00000397200 MS4A18Q3C1V0 323 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 YIF1BQ5BJH7 314 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 CCBE1Q6UXH8 406 aaPredicted RBP13.21□□□□□ -0.3
CAPN3-207ENST00000397200 GPAT4Q86UL3 456 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 LRRC28Q86X40 367 aaPredicted RBP13.21□□□□□ -0.3
CAPN3-207ENST00000397200 ZGRF1Q86YA3 2104 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 ST6GALNAC3Q8NDV1 305 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 FNDC9Q8TBE3 224 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 ITPKCQ96DU7 683 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 MAP6Q96JE9 813 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 TRIB1Q96RU8 372 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 INTS14Q96SY0 518 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 SRA1Q9HD15 236 aaKnown RBP13.21□□□□□ -0.3
CAPN3-207ENST00000397200 KLHL13Q9P2N7 655 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 B9D1Q9UPM9 204 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 RASD1Q9Y272 281 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 ZNF175Q9Y473 711 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 SHANK1Q9Y566 2161 aa13.21□□□□□ -0.3
CAPN3-207ENST00000397200 A0A1W2PNV4 684 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 SLC22A20A6NK97 555 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 BOLA2-SMG1P6H3BVE0 249 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 PRRG2O14669 202 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 RAMP1O60894 148 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 TMCC2O75069 709 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 TMEM127O75204 238 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 APOA1P02647 267 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 FCGR2AP12318 317 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 RAB3BP20337 219 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 APEX1P27695 318 aaKnown RBP13.2□□□□□ -0.3
CAPN3-207ENST00000397200 PTGER4P35408 488 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 PSMB10P40306 273 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 RFX2P48378 723 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 OR10A3P58181 314 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 SCN1BQ07699 218 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 CEP78Q5JTW2 689 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 FAM220AQ7Z4H9 259 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 P4HA3Q7Z4N8 544 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 ADGRE4PQ86SQ3 457 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 KDM8Q8N371 416 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 ASB10Q8WXI3 467 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 RGP1Q92546 391 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-207ENST00000397200 TXNDC15Q96J42 360 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 BBC3Q96PG8 261 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-207ENST00000397200 CYSLTR2Q9NS75 346 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 ZNF281Q9Y2X9 895 aa13.2□□□□□ -0.3
CAPN3-207ENST00000397200 SLC22A23A1A5C7 686 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 TVP23AA6NH52 213 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 NOTOA8MTQ0 251 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 SSX4O60224 188 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 CYTIPO60759 359 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 OR8G3PP0DMU2 310 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 PSKH1P11801 424 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 POU3F1Q03052 451 aaPredicted RBP13.19□□□□□ -0.3
CAPN3-207ENST00000397200 RASGEF1BQ0VAM2 473 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 ACSF3Q4G176 576 aaPredicted RBP13.19□□□□□ -0.3
CAPN3-207ENST00000397200 IDNKQ5T6J7 187 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 LIPNQ5VXI9 398 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 FAM205BPQ63HN1 556 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 ABLIM2Q6H8Q1 611 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 FDX2Q6P4F2 183 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 PLXDC2Q6UX71 529 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 UEVLDQ8IX04 471 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 OTOSQ8NHW6 89 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 RNF128Q8TEB7 428 aa13.19□□□□□ -0.3
CAPN3-207ENST00000397200 ADAD1Q96M93 576 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms