RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 FMODQ06828 376 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 NPTX1Q15818 432 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 TTMPQ5BVD1 217 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 ARMC4Q5T2S8 1044 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 FITM2Q8N6M3 262 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 SMYD1Q8NB12 490 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 OR8B3Q8NGG8 313 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 OR6T1Q8NGN1 323 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 FAM110DQ8TAY7 271 aaPredicted RBP12.48□□□□□ -0.41
SEC13-206ENST00000397102 SSMEM1Q8WWF3 244 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 NSMAFQ92636 917 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 MAGEB18Q96M61 343 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 OR8B2Q96RD0 313 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 INIPQ9NRY2 104 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 TBCCD1Q9NVR7 557 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 NDRG4Q9ULP0 352 aaKnown RBP12.48□□□□□ -0.41
SEC13-206ENST00000397102 SLC7A7Q9UM01 511 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 TIMM10BQ9Y5J6 103 aa12.48□□□□□ -0.41
SEC13-206ENST00000397102 TRAPPC13A5PLN9 417 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 C3orf80F5H4A9 247 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 FSTL3O95633 263 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 LAP3P28838 519 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 PCBD1P61457 104 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 CD47Q08722 323 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 C2orf68Q2NKX9 166 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 BEAN1Q3B7T3 259 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 RUSC1-AS1Q66K80 236 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 SLC25A47Q6Q0C1 308 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 NLRC3Q7RTR2 1065 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 TBC1D15Q8TC07 691 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 HDAC2Q92769 488 aaKnown RBP12.47□□□□□ -0.41
SEC13-206ENST00000397102 TMEM246Q9BRR3 403 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 POFUT1Q9H488 388 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 MEPEQ9NQ76 525 aaPredicted RBP12.47□□□□□ -0.41
SEC13-206ENST00000397102 THAP1Q9NVV9 213 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 CORO2BQ9UQ03 480 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 ANGPT4Q9Y264 503 aa12.47□□□□□ -0.41
SEC13-206ENST00000397102 C5orf63A6NC05 138 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 NPIPB13A6NJU9 1138 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 NPIPB4C9JG80 1138 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 PIN1P1O15428 100 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 GPR137BO60478 399 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 SNNO75324 88 aaPredicted RBP12.46□□□□□ -0.41
SEC13-206ENST00000397102 ZNF205O95201 554 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 CYB5R3P00387 301 aaPredicted RBP12.46□□□□□ -0.41
SEC13-206ENST00000397102 VIMP08670 466 aaKnown RBP12.46□□□□□ -0.41
SEC13-206ENST00000397102 GPX2P18283 190 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 AQP2P41181 271 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 PITPNBP48739 271 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 MPP2Q14168 576 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 DUSP7Q16829 419 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 ZNF404Q494X3 552 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 Q6ZPA2 131 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 PTOV1Q86YD1 416 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 ZNF420Q8TAQ5 688 aaPredicted RBP12.46□□□□□ -0.41
SEC13-206ENST00000397102 C10orf82Q8WW14 230 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 CMBLQ96DG6 245 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 OR52B2Q96RD2 323 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 IKZF5Q9H5V7 419 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 VAPAQ9P0L0 249 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 SLAMF8Q9P0V8 285 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 KIF17Q9P2E2 1029 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 CLN8Q9UBY8 286 aa12.46□□□□□ -0.41
SEC13-206ENST00000397102 TET2Q6N021 2002 aaPredicted RBP12.45□□□□□ -0.42
SEC13-206ENST00000397102 TRBV5-3A0A0A0MS03 114 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 G3V4G9 280 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 PHYHO14832 338 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 RGS16O15492 202 aaPredicted RBP12.45□□□□□ -0.42
SEC13-206ENST00000397102 ENSAO43768 121 aaKnown RBP12.45□□□□□ -0.42
SEC13-206ENST00000397102 COX5BP10606 129 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 FUT1P19526 365 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 PCBP3P57721 371 aaKnown RBP12.45□□□□□ -0.42
SEC13-206ENST00000397102 ZNF181Q2M3W8 571 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 KRT71Q3SY84 523 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 KPRPQ5T749 579 aaPredicted RBP12.45□□□□□ -0.42
SEC13-206ENST00000397102 WDR25Q64LD2 544 aaPredicted RBP12.45□□□□□ -0.42
SEC13-206ENST00000397102 FOXL2NBQ6ZUU3 175 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 SYT9Q86SS6 491 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 TSPYL5Q86VY4 417 aaPredicted RBP12.45□□□□□ -0.42
SEC13-206ENST00000397102 RBM45Q8IUH3 476 aaKnown RBP12.45□□□□□ -0.42
SEC13-206ENST00000397102 ATG16L2Q8NAA4 619 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 GPR32P1Q8NGA4 272 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 OR4D11Q8NGI4 311 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 HAVCR1Q96D42 359 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 MEGF10Q96KG7 1140 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 PAIP2Q9BPZ3 127 aaKnown RBP12.45□□□□□ -0.42
SEC13-206ENST00000397102 PRSS27Q9BQR3 290 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 PCGF1Q9BSM1 259 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 ALG12Q9BV10 488 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 CDADC1Q9BWV3 514 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 PCDHAC1Q9H158 963 aa12.45□□□□□ -0.42
SEC13-206ENST00000397102 KMT2CQ8NEZ4 4911 aaKnown RBP12.45□□□□□ -0.42
SEC13-206ENST00000397102 EVPLLA8MZ36 301 aa12.44□□□□□ -0.42
SEC13-206ENST00000397102 H0YL77 283 aa12.44□□□□□ -0.42
SEC13-206ENST00000397102 P2RY10O00398 339 aa12.44□□□□□ -0.42
SEC13-206ENST00000397102 OR7A10O76100 309 aa12.44□□□□□ -0.42
SEC13-206ENST00000397102 MT-ND1P03886 318 aa12.44□□□□□ -0.42
SEC13-206ENST00000397102 OPN1SWP03999 348 aa12.44□□□□□ -0.42
SEC13-206ENST00000397102 CSF1P09603 554 aa12.44□□□□□ -0.42
SEC13-206ENST00000397102 TSPAN19P0C672 248 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms