RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 ST8SIA3O43173 380 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 KLKB1P03952 638 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 THBS1P07996 1170 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 GPX3P22352 226 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 NKX2-5P52952 324 aaPredicted RBP6.58□□□□□ -1.36
UPF2-203ENST00000397053 LIM2P55344 173 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SPANXN5Q5MJ07 72 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 STUMQ69YW2 141 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 TMEM65Q6PI78 240 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 KLHDC8BQ8IXV7 354 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 DNAJC5GQ8N7S2 189 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 SLC39A13Q96H72 371 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 MRGPRX1Q96LB2 322 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 ARPC5LQ9BPX5 153 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 GPR45Q9Y5Y3 372 aa6.58□□□□□ -1.36
UPF2-203ENST00000397053 CICQ96RK0 1608 aaPredicted RBP6.57□□□□□ -1.36
UPF2-203ENST00000397053 LRRC3CA6NJW4 275 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 DHRS4L1P0CG22 281 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 RPS27AP62979 156 aaKnown RBP6.57□□□□□ -1.36
UPF2-203ENST00000397053 UBA52P62987 128 aaKnown RBP6.57□□□□□ -1.36
UPF2-203ENST00000397053 VMA21Q3ZAQ7 101 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 KMT5CQ86Y97 462 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 WDR31Q8NA23 367 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 SFT2D1Q8WV19 159 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 RAB1CQ92928 201 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 GRAMD2BQ96HH9 432 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 SEC22CQ9BRL7 303 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 SOX7Q9BT81 388 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 CXorf36Q9H7Y0 433 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 DUSP22Q9NRW4 184 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 PLSCR3Q9NRY6 295 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 ZNF816-ZNF321PA0A0X1KG74 233 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 CDC14BO60729 498 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 CBR3O75828 277 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 PMP2P02689 132 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 IL5P05113 134 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 FURINP09958 794 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 CALCBP10092 127 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 ABCD3P28288 659 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 TEAD1P28347 426 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 GDNFP39905 211 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 MEOX1P50221 254 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 RHOBP62745 196 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 METRNLQ641Q3 311 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 MORN4Q8NDC4 146 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 OR10P1Q8NGE3 313 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 RBM14Q96PK6 669 aaKnown RBP6.57□□□□□ -1.36
UPF2-203ENST00000397053 OR52A5Q9H2C5 316 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 HSD3B7Q9H2F3 369 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 ZNF696Q9H7X3 374 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 CTSFQ9UBX1 484 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 NTNG1Q9Y2I2 539 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 TIMM9Q9Y5J7 89 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 PREX1Q8TCU6 1659 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 MYH10P35580 1976 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 KIF1AQ12756 1690 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 F5H697 171 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 OR7A17O14581 309 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 ST8SIA5O15466 376 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 OIP5O43482 229 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 SNNO75324 88 aaPredicted RBP6.57□□□□□ -1.36
UPF2-203ENST00000397053 NRASP01111 189 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 ELK1P19419 428 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 PPICP45877 212 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 CAPZBP47756 277 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 ZNF252P-AS1Q0IIN9 211 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 GGTA1PQ4G0N0 100 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 PYCR3Q53H96 274 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 TBPL2Q6SJ96 375 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 SPRED1Q7Z699 444 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 OR52H1Q8NGJ2 320 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 TSLPQ969D9 159 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 TM4SF18Q96CE8 201 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 OR2M2Q96R28 347 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 DHRS4Q9BTZ2 278 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 C20orf24Q9BUV8 137 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 RNASEK-C17orf49H0YIS7 233 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 GFYI3L273 518 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 M0QYG6 137 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 GSCP56915 257 aaPredicted RBP6.57□□□□□ -1.36
UPF2-203ENST00000397053 MS4A2Q01362 244 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 ALKBH6Q3KRA9 238 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 BCL7AQ4VC05 210 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 ZC3H3Q8IXZ2 948 aaKnown RBP6.57□□□□□ -1.36
UPF2-203ENST00000397053 ARHGEF39Q8N4T4 335 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 LILRA3Q8N6C8 439 aaPredicted RBP6.57□□□□□ -1.36
UPF2-203ENST00000397053 KLHDC9Q8NEP7 349 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 OR10K1Q8NGX5 313 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 MARCH5Q9NX47 278 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 CGGBP1Q9UFW8 167 aaPredicted RBP6.57□□□□□ -1.36
UPF2-203ENST00000397053 ADGRB1O14514 1584 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 IQGAP1P46940 1657 aa6.57□□□□□ -1.36
UPF2-203ENST00000397053 ONECUT2O95948 504 aa6.56□□□□□ -1.36
UPF2-203ENST00000397053 SHBQ15464 509 aa6.56□□□□□ -1.36
UPF2-203ENST00000397053 MICBQ29980 383 aa6.56□□□□□ -1.36
UPF2-203ENST00000397053 TRMT12Q53H54 448 aaKnown RBP6.56□□□□□ -1.36
UPF2-203ENST00000397053 TMEM108Q6UXF1 575 aa6.56□□□□□ -1.36
UPF2-203ENST00000397053 GDF7Q7Z4P5 450 aa6.56□□□□□ -1.36
UPF2-203ENST00000397053 VASH2Q86V25 355 aa6.56□□□□□ -1.36
UPF2-203ENST00000397053 SFTPA2Q8IWL1 248 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms