RNA–Protein interactions for RNA: ENST00000397036.4

MCF2L-209, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 1,544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-209ENST00000397036 PLSCR4Q9NRQ2 329 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 SLCO1C1Q9NYB5 712 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 UPB1Q9UBR1 384 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 GDF2Q9UK05 429 aaPredicted RBP11.97□□□□□ -0.49
MCF2L-209ENST00000397036 GNG8Q9UK08 70 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 POLEQ07864 2286 aa11.97□□□□□ -0.49
MCF2L-209ENST00000397036 PHF3Q92576 2039 aaKnown RBP11.97□□□□□ -0.49
MCF2L-209ENST00000397036 E9PI62 339 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 H3BMQ9 156 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 PRRG2O14669 202 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 AIREO43918 545 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 HLA-DPB1P04440 258 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 TPOP07202 933 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 OR8G3PP0DMU2 310 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 GADD45AP24522 165 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 MPGP29372 298 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 FGF9P31371 208 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-209ENST00000397036 CEACAM8P31997 349 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-209ENST00000397036 GTF2A1P52655 376 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-209ENST00000397036 RIDAP52758 137 aaKnown RBP11.96□□□□□ -0.49
MCF2L-209ENST00000397036 PCBD1P61457 104 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 RBPJQ06330 500 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 RPTNQ6XPR3 784 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 SEM1Q6ZVN7 128 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 KRT77Q7Z794 578 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 DPPA2Q7Z7J5 298 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 SLC22A24Q8N4F4 322 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 YIPF7Q8N8F6 280 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 SMIM19Q96E16 107 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 MAP6Q96JE9 813 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 ALKBH3Q96Q83 286 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-209ENST00000397036 EMC7Q9NPA0 242 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 DDX28Q9NUL7 540 aaKnown RBP11.96□□□□□ -0.49
MCF2L-209ENST00000397036 ACOXLQ9NUZ1 547 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 ASF1BQ9NVP2 202 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 IKZF2Q9UKS7 526 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 STUB1Q9UNE7 303 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 FAM215AQ9Y5M1 114 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 SIRT4Q9Y6E7 314 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-209ENST00000397036 NCOA6Q14686 2063 aaPredicted RBP11.96□□□□□ -0.49
MCF2L-209ENST00000397036 MED12LQ86YW9 2145 aa11.96□□□□□ -0.49
MCF2L-209ENST00000397036 TRDV1A0A1B0GX56 115 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 MAGEB4O15481 346 aaPredicted RBP11.96□□□□□ -0.5
MCF2L-209ENST00000397036 FARS2O95363 451 aaKnown RBP11.96□□□□□ -0.5
MCF2L-209ENST00000397036 ABOP16442 354 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 EDNRAP25101 427 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 MMP16P51512 607 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 CNPY1Q3B7I2 92 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 ZNF544Q6NX49 715 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 GFRALQ6UXV0 394 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 TFAP2EQ6VUC0 442 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.96□□□□□ -0.5
MCF2L-209ENST00000397036 CD163Q86VB7 1156 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 SLAMF6Q96DU3 332 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 PGLYRP3Q96LB9 341 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 PNRC2Q9NPJ4 139 aaKnown RBP11.96□□□□□ -0.5
MCF2L-209ENST00000397036 ASH2LQ9UBL3 628 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 SSR3Q9UNL2 185 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 POLR1DQ9Y2S0 133 aa11.96□□□□□ -0.5
MCF2L-209ENST00000397036 FREM1Q5H8C1 2179 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 ACOD1A6NK06 481 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 ZNF878C9JN71 531 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 GPX5O75715 221 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 HOXB1P14653 301 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-209ENST00000397036 UGT2B10P36537 528 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 SCRN3Q0VDG4 424 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 ECH1Q13011 328 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 ALKBH1Q13686 389 aaKnown RBP11.95□□□□□ -0.5
MCF2L-209ENST00000397036 CORO6Q6QEF8 472 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 LRRN1Q6UXK5 716 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 DOLPP1Q86YN1 238 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 LINC00346Q8IVM7 164 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 CCDC36Q8IYA8 594 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 OR10S1Q8NGN2 331 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 OR2G2Q8NGZ5 317 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 PHYHIPQ92561 330 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 OR51E2Q9H255 320 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 KCNN2Q9H2S1 579 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 ATPIF1Q9UII2 106 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 LRP12Q9Y561 859 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 TIMM10BQ9Y5J6 103 aa11.95□□□□□ -0.5
MCF2L-209ENST00000397036 DSPP15924 2871 aaKnown RBP11.94□□□□□ -0.5
MCF2L-209ENST00000397036 TRBV2A0A0J9YWF9 115 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 TMEM212A6NML5 194 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 ZNHIT1O43257 154 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 SRSF10O75494 262 aaKnown RBP11.94□□□□□ -0.5
MCF2L-209ENST00000397036 SC5DO75845 299 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 TNFSF13O75888 250 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 TOXO94900 526 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 IL18BPO95998 194 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 SERPINA3P01011 423 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 CGAP01215 116 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 IL2RAP01589 272 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 H2BFMP0C1H6 154 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 CD8BP10966 210 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 OTX1P32242 354 aaPredicted RBP11.94□□□□□ -0.5
MCF2L-209ENST00000397036 GRB2P62993 217 aaKnown RBP11.94□□□□□ -0.5
MCF2L-209ENST00000397036 TUBA1BP68363 451 aa11.94□□□□□ -0.5
MCF2L-209ENST00000397036 ARF1P84077 181 aaKnown RBP11.94□□□□□ -0.5
MCF2L-209ENST00000397036 TGFBR3Q03167 851 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms