RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 REEP3Q6NUK4 255 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 SLC25A47Q6Q0C1 308 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 ARL9Q6T311 187 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 HIST3H2AQ7L7L0 130 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 RANBP3LQ86VV4 465 aaPredicted RBP7□□□□□ -1.29
SCFD1-202ENST00000396629 ALDH16A1Q8IZ83 802 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 GATAD2BQ8WXI9 593 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 HIST1H2ACQ93077 130 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 HAVCR1Q96D42 359 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 TBX15Q96SF7 602 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 CDADC1Q9BWV3 514 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 ACOXLQ9NUZ1 547 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 TBCCD1Q9NVR7 557 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 C22orf46C9J442 243 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 PHYHO14832 338 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 ENSAO43768 121 aaKnown RBP7□□□□□ -1.29
SCFD1-202ENST00000396629 ZNF205O95201 554 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 THY1P04216 161 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 VSIG8P0DPA2 414 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 FUT4P22083 530 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 CDK6Q00534 326 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 BST1Q10588 318 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 TTC33Q6PID6 262 aaPredicted RBP7□□□□□ -1.29
SCFD1-202ENST00000396629 NLRC3Q7RTR2 1065 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 HDDC2Q7Z4H3 204 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 ZNF420Q8TAQ5 688 aaPredicted RBP7□□□□□ -1.29
SCFD1-202ENST00000396629 GTF2H4Q92759 462 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 CMBLQ96DG6 245 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 MEGF10Q96KG7 1140 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 MCHR1Q99705 422 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 PCGF1Q9BSM1 259 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 TRIM15Q9C019 465 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 ZIM2Q9NZV7 527 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 CLN8Q9UBY8 286 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 TIMM10BQ9Y5J6 103 aa7□□□□□ -1.29
SCFD1-202ENST00000396629 IGHV1-69DA0A0B4J2H0 117 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 A0A1W2PRG6 482 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 ZNF879B4DU55 563 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 MCIDASD6RGH6 385 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 IGHV1-69P01742 117 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 SFTPBP07988 381 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 COX5BP10606 129 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 IDO1P14902 403 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 PCBP3P57721 371 aaKnown RBP6.99□□□□□ -1.29
SCFD1-202ENST00000396629 C6orf10Q5SRN2 563 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 ARMC4Q5T2S8 1044 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 GCNT6Q5T4J0 391 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 LYPD2Q6UXB3 125 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 FOXL2NBQ6ZUU3 175 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 NANOGNBQ7Z5D8 188 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 C10orf111Q8N326 155 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 HDAC2Q92769 488 aaKnown RBP6.99□□□□□ -1.29
SCFD1-202ENST00000396629 ZNF426Q9BUY5 554 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 WDR55Q9H6Y2 383 aaPredicted RBP6.99□□□□□ -1.29
SCFD1-202ENST00000396629 KIF17Q9P2E2 1029 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 STX18Q9P2W9 335 aaKnown RBP6.99□□□□□ -1.29
SCFD1-202ENST00000396629 SLC13A4Q9UKG4 626 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 STARD10Q9Y365 291 aa6.99□□□□□ -1.29
SCFD1-202ENST00000396629 ZNF816-ZNF321PA0A0X1KG74 233 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 GMNCA6NCL1 334 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 BLOC1S5-TXNDC5H3BN57 136 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 TOX4O94842 621 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 ABHD16AO95870 558 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 F13BP05160 661 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 LIPFP07098 398 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 TSPAN19P0C672 248 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 LAP3P28838 519 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 EPHA3P29320 983 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 DAP3P51398 398 aaKnown RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 POLR2JP52435 117 aaKnown RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 PCBD1P61457 104 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 FMODQ06828 376 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 RPL18Q07020 188 aaKnown RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 HERPUD1Q15011 391 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 NPTX1Q15818 432 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 DCDC5Q6ZRR9 648 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 SYT9Q86SS6 491 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 LRTOMTQ8WZ04 291 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 NSMAFQ92636 917 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 ANP32BQ92688 251 aaKnown RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 PTP4A1Q93096 173 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 ROPN1BQ9BZX4 212 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 DPAGT1Q9H3H5 408 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 ROPN1Q9HAT0 212 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 INIPQ9NRY2 104 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 NECAP2Q9NVZ3 263 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 AURKAIP1Q9NWT8 199 aaPredicted RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 NDRG4Q9ULP0 352 aaKnown RBP6.98□□□□□ -1.29
SCFD1-202ENST00000396629 GMEB1Q9Y692 573 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 COL7A1Q02388 2944 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 A0A0U1RQK1 487 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 NPIPB13A6NJU9 1138 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 NPIPB4C9JG80 1138 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 M0R3H8 397 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 SERPINB7O75635 380 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 UMPSP11172 480 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 BGNP21810 368 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 PSMB10P40306 273 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 PMELP40967 661 aa6.98□□□□□ -1.29
SCFD1-202ENST00000396629 NPY4RP50391 375 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms