RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 LCMT2O60294 686 aaKnown RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 LALBAP00709 142 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 IL2RAP01589 272 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 TPOP07202 933 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 QDPRP09417 244 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 CD1EP15812 388 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM41BQ5BJD5 291 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 HIST2H3AQ71DI3 136 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 MAVSQ7Z434 540 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 SYT9Q86SS6 491 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 B3GALT5Q9Y2C3 310 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 A0A1W2PR48 441 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 OR2A25A4D2G3 310 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 TBXA2RP21731 343 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 ACHEP22303 614 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 LAP3P28838 519 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 SLC35A2P78381 396 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM207Q6UWW9 146 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM217Q8N7C4 229 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 LINC01465Q8N7H1 131 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 OR10K1Q8NGX5 313 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 SMIM19Q96E16 107 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 MRGPRX4Q96LA9 322 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 PLK3Q9H4B4 646 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 AKR7A3O95154 331 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 F2RP25116 425 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 PIGAP37287 484 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 MRPL58Q14197 206 aaKnown RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 TRMT12Q53H54 448 aaKnown RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 LIPNQ5VXI9 398 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 OR10K2Q6IF99 312 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 FJX1Q86VR8 437 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 SIAH3Q8IW03 269 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 YIPF5Q969M3 257 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 RNF170Q96K19 258 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM43Q9BTV4 400 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 ZMAT3Q9HA38 289 aaKnown RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF705GA8MUZ8 300 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 FLI1Q01543 452 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 FAM199XQ6PEV8 388 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 ALKAL2Q6UX46 152 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF75AQ96N20 296 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 CDCA4Q9BXL8 241 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 FAM234AQ9H0X4 552 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 MBNL1Q9NR56 388 aaKnown RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 CTSFQ9UBX1 484 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 PUS1Q9Y606 427 aaKnown RBP eCLIP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 SVILO95425 2214 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 FIGNL2A6NMB9 653 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 STMND1H3BQB6 276 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 PRKACAP17612 351 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 POLR2IP36954 125 aaKnown RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 PNLIPRP2P54317 469 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 HES1Q14469 280 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 ESPL1Q14674 2120 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 GLIPR1L1Q6UWM5 242 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 Q6ZPB1 254 aaPredicted RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 CDC20BQ86Y33 519 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 LYSMD2Q8IV50 215 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 BCORP1Q8N888 145 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 KIAA1958Q8N8K9 716 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 OR5M11Q96RB7 305 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 GFOD1Q9NXC2 390 aa4.99□□□□□ -1.61
VPS13C-204ENST00000395898 MAP1BP46821 2468 aaKnown RBP4.99□□□□□ -1.61
VPS13C-204ENST00000395898 CYC1P08574 325 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SLC6A12P48065 614 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 IAH1Q2TAA2 248 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 CCSMST1Q4G0I0 132 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ZNF626Q68DY1 528 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SLC7A5P1Q8MH63 180 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 RPL3LQ92901 407 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ASH2LQ9UBL3 628 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 METTL15P1P0C7V9 234 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ADRA2CP18825 462 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 GPR85P60893 370 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SHHQ15465 462 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 STT3BQ8TCJ2 826 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 WFDC5Q8TCV5 224 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 PDCD1LG2Q9BQ51 273 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 GABARAPL3Q9BY60 117 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 TUBB1Q9H4B7 451 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 LIN7CQ9NUP9 197 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ZAR1LA6NP61 321 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 KLK8O60259 260 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SLC2A1P11166 492 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 CASP3P42574 277 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 ERHP84090 104 aaKnown RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 TMEM240Q5SV17 173 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 KDF1Q8NAX2 398 aaPredicted RBP4.98□□□□□ -1.61
VPS13C-204ENST00000395898 SCCPDHQ8NBX0 429 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 OR10X1Q8NGY0 326 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 WWTR1Q9GZV5 400 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 GABARAPL1Q9H0R8 117 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 FGF22Q9HCT0 170 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 BCL2L10Q9HD36 194 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 PAPPAQ13219 1627 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 CRYM-AS1A6NIL9 109 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 PRRT4C9JH25 899 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 M0R082 166 aa4.98□□□□□ -1.61
VPS13C-204ENST00000395898 M0R135 149 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms