RNA–Protein interactions for RNA: ENST00000394299.6

GPC3-202, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 2,379 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-202ENST00000394299 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.4□□□□□ -0.26
GPC3-202ENST00000394299 OR52I2Q8NH67 350 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 SLC7A6Q92536 515 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 ZBTB8AQ96BR9 441 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 SLAMF6Q96DU3 332 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 OXGR1Q96P68 337 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 TAAR9Q96RI9 348 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 P4HTMQ9NXG6 502 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 MYEF2Q9P2K5 600 aaKnown RBP13.4□□□□□ -0.26
GPC3-202ENST00000394299 CYB5R1Q9UHQ9 305 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 DKKL1Q9UK85 242 aa13.4□□□□□ -0.26
GPC3-202ENST00000394299 AQP7P3A6NL99 342 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 INMT-MINDY4F8WBC2 141 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 IGHG1P01857 330 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 CSRP1P21291 193 aaKnown RBP13.39□□□□□ -0.27
GPC3-202ENST00000394299 ENPP1P22413 925 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 GIFP27352 417 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 PHYHD1Q5SRE7 291 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 DHRS13Q6UX07 377 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 NAXDQ8IW45 347 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 ESX1Q8N693 406 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 NOXO1Q8NFA2 376 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 OR10H5Q8NGA6 315 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 ZNF385AQ96PM9 386 aaKnown RBP13.39□□□□□ -0.27
GPC3-202ENST00000394299 GAL3ST1Q99999 423 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 SPRY4Q9C004 299 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 STRADBQ9C0K7 418 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 NEK6Q9HC98 313 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 DDX28Q9NUL7 540 aaKnown RBP13.39□□□□□ -0.27
GPC3-202ENST00000394299 KLHL9Q9P2J3 617 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 HDGFL3Q9Y3E1 203 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 LHFPL6Q9Y693 200 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 A0A0J9YW62 118 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 TNFSF11O14788 317 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 AQP8O94778 261 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 SLC2A1P11166 492 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 GDNFP39905 211 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 DSCR4P56555 118 aaPredicted RBP13.39□□□□□ -0.27
GPC3-202ENST00000394299 PITPNAQ00169 270 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 TMEM255AQ5JRV8 349 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 THEM4Q5T1C6 240 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 ZNF227Q86WZ6 799 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 RNF133Q8WVZ7 376 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 NTNG2Q96CW9 530 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 CGGBP1Q9UFW8 167 aaPredicted RBP13.39□□□□□ -0.27
GPC3-202ENST00000394299 CACNA1HO95180 2353 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 LOC400499M0QZD8 3231 aa13.39□□□□□ -0.27
GPC3-202ENST00000394299 LOC107986453A0A1B0GWG9 222 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 DCDC2BA2VCK2 349 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 HSPB2A8KAH6 182 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 FCER2P06734 321 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 ART1P52961 327 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 SPOCK1Q08629 439 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 SSPNQ14714 243 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 HSPB2Q16082 182 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 FAM205BPQ63HN1 556 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 SLC25A43Q8WUT9 341 aaPredicted RBP13.38□□□□□ -0.27
GPC3-202ENST00000394299 S100A16Q96FQ6 103 aaKnown RBP13.38□□□□□ -0.27
GPC3-202ENST00000394299 SOX7Q9BT81 388 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 DEPPQ9NTK1 212 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 ZNF726A6NNF4 738 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 RER1O15258 196 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 CALCBP10092 127 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 STARP49675 285 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 PRKXP51817 358 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 SLC35A1P78382 337 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 H3F3AP84243 136 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 ACER2Q5QJU3 275 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 TMEM69Q5SWH9 247 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 FAAP20Q6NZ36 180 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 SLC25A47Q6Q0C1 308 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 BEST3Q8N1M1 668 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 OR13C3Q8NGS6 347 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 OR6X1Q8NH79 312 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 SMIM4Q8WVI0 70 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 PSMF1Q92530 271 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 NUDT15Q9NV35 164 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 ASH2LQ9UBL3 628 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 STEAP1Q9UHE8 339 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 GDF2Q9UK05 429 aaPredicted RBP13.38□□□□□ -0.27
GPC3-202ENST00000394299 BOLA1Q9Y3E2 137 aa13.38□□□□□ -0.27
GPC3-202ENST00000394299 DOCK10Q96BY6 2186 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 PINLYPA6NC86 204 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 GMDSO60547 372 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 HRGP04196 525 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 ARSBP15848 533 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 KLF9Q13886 244 aaPredicted RBP13.37□□□□□ -0.27
GPC3-202ENST00000394299 C2orf76Q3KRA6 126 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 BCL2L15Q5TBC7 163 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 SFRP4Q6FHJ7 346 aaPredicted RBP13.37□□□□□ -0.27
GPC3-202ENST00000394299 TMEM81Q6P7N7 255 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 HAVCR1Q96D42 359 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 SRXN1Q9BYN0 137 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 BEX1Q9HBH7 125 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 POLR1DQ9Y2S0 133 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 CBR3O75828 277 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 KDM4BO94953 1096 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 WDPCPO95876 746 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 POU3F4P49335 361 aa13.37□□□□□ -0.27
GPC3-202ENST00000394299 OC90Q02509 493 aaPredicted RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms