RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 PIP5K1CO60331 668 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 ABHD16AO95870 558 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 GPANK1O95872 356 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 GSTM3P21266 225 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 MTNR1AP48039 350 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 ERFP50548 548 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 SRSF4Q08170 494 aaKnown RBP12.88□□□□□ -0.35
CHMP3-202ENST00000393773 TOP3AQ13472 1001 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-202ENST00000393773 SPATC1Q76KD6 591 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 ZER1Q7Z7L7 766 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 ALDH16A1Q8IZ83 802 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 MUC20Q8N307 709 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-202ENST00000393773 TMEM239Q8WW34 195 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 PDP1Q9P0J1 537 aaPredicted RBP12.88□□□□□ -0.35
CHMP3-202ENST00000393773 IL19Q9UHD0 177 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 IL20RAQ9UHF4 553 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 NDRG4Q9ULP0 352 aaKnown RBP12.88□□□□□ -0.35
CHMP3-202ENST00000393773 PPP1R3CQ9UQK1 317 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 TIMM10BQ9Y5J6 103 aa12.88□□□□□ -0.35
CHMP3-202ENST00000393773 TMEM178BH3BS89 294 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 OR5F1O95221 314 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 SCG5P05408 212 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 TNFRSF1BP20333 461 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 TNFSF4P23510 183 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 GZMMP51124 257 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 TAS2R41P59536 307 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 PCBD1P61457 104 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 CCDC80Q76M96 950 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 POU5F2Q8N7G0 328 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 SLC26A7Q8TE54 656 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 OR2V2Q96R30 315 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 SSBP3Q9BWW4 388 aaPredicted RBP12.87□□□□□ -0.35
CHMP3-202ENST00000393773 MAN2C1Q9NTJ4 1040 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 TBCCD1Q9NVR7 557 aa12.87□□□□□ -0.35
CHMP3-202ENST00000393773 A0A1W2PPL8 197 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 HOXA3O43365 443 aaPredicted RBP12.86□□□□□ -0.35
CHMP3-202ENST00000393773 VIMP08670 466 aaKnown RBP12.86□□□□□ -0.35
CHMP3-202ENST00000393773 WNT2P09544 360 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 COX5BP10606 129 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 RPS2P15880 293 aaKnown RBP12.86□□□□□ -0.35
CHMP3-202ENST00000393773 MSR1P21757 451 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 RPL27P61353 136 aaKnown RBP12.86□□□□□ -0.35
CHMP3-202ENST00000393773 LAPTM4AQ15012 233 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 ALG10Q5BKT4 473 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 INTS11Q5TA45 600 aaKnown RBP12.86□□□□□ -0.35
CHMP3-202ENST00000393773 C16orf87Q6PH81 154 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 ARL9Q6T311 187 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 LRRN1Q6UXK5 716 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 KLBQ86Z14 1044 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 LRRC75AQ8NAA5 344 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 OR10A6Q8NH74 314 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 FNDC8Q8TC99 324 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 RASSF5Q8WWW0 418 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 THOC1Q96FV9 657 aaKnown RBP12.86□□□□□ -0.35
CHMP3-202ENST00000393773 POLR2J2Q9GZM3 115 aaKnown RBP12.86□□□□□ -0.35
CHMP3-202ENST00000393773 POLR2J3Q9H1A7 115 aaKnown RBP12.86□□□□□ -0.35
CHMP3-202ENST00000393773 PRDM13Q9H4Q3 707 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 GCM1Q9NP62 436 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 POLE4Q9NR33 117 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 SH3GLB1Q9Y371 365 aa12.86□□□□□ -0.35
CHMP3-202ENST00000393773 DOK2O60496 412 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 SHOX2O60902 331 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-202ENST00000393773 THRBP10828 461 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 RELBQ01201 579 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 PIN1Q13526 163 aaPredicted RBP12.85□□□□□ -0.35
CHMP3-202ENST00000393773 VMACQ2NL98 169 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 DEFB112Q30KQ8 113 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 FAM205BPQ63HN1 556 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 SYT9Q86SS6 491 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 IGFN1Q86VF2 1251 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 CITED1Q99966 193 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 EMC7Q9NPA0 242 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 RIMS3Q9UJD0 308 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 NDUFAF1Q9Y375 327 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 MED31Q9Y3C7 131 aa12.85□□□□□ -0.35
CHMP3-202ENST00000393773 A0A1B0GUS0 222 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 FAM181BA6NEQ2 426 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 C12orf71A8MTZ7 269 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 SRRM5B3KS81 715 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 ANGPT2O15123 496 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 SURF4O15260 269 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 KNG1P01042 644 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 TUBG1P23258 451 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 CPT2P23786 658 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 HTR5AP47898 357 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 RAG2P55895 527 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 FHL1Q13642 323 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 BTNL3Q6UXE8 466 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 BRD3OSQ6XYD6 125 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 RHOUQ7L0Q8 258 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 VASH1Q7L8A9 365 aaPredicted RBP12.84□□□□□ -0.35
CHMP3-202ENST00000393773 OR10AD1Q8NGE0 317 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 ZNF420Q8TAQ5 688 aaPredicted RBP12.84□□□□□ -0.35
CHMP3-202ENST00000393773 CMBLQ96DG6 245 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 RBP7Q96R05 134 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 TMBIM4Q9HC24 238 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 TUBG2Q9NRH3 451 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 STARD10Q9Y365 291 aa12.84□□□□□ -0.35
CHMP3-202ENST00000393773 H7C1C5 153 aa12.83□□□□□ -0.36
CHMP3-202ENST00000393773 ZNF205O95201 554 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms