RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 ESRRGP62508 458 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 DBPQ10586 325 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 MEP1BQ16820 701 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 SHEQ5VZ18 495 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 OTPQ5XKR4 325 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 C11orf71Q6IPW1 123 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 PAQR4Q8N4S7 273 aaPredicted RBP16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 GJC3Q8NFK1 279 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 OR9Q1Q8NGQ5 310 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 OTULINQ96BN8 352 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 PKP2Q99959 881 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 NMNAT2Q9BZQ4 307 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 EIF3KQ9UBQ5 218 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 NDRG4Q9ULP0 352 aaKnown RBP16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 OAZ3Q9UMX2 235 aa16.4■□□□□ 0.22
PDLIM7-204ENST00000393546 LOC100509620A0A075B734 347 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 SAC3D1A6NKF1 404 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 ZNF823P16415 610 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 PAICSP22234 425 aaKnown RBP16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 PCSK6P29122 969 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 UCP2P55851 309 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 ATP5J2P56134 94 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 SWI5Q1ZZU3 235 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 MST1LQ2TV78 715 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 KDM4DQ6B0I6 523 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 UNQ6126/PRO20091Q6UXV3 157 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 SPNS3Q6ZMD2 512 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 PLEKHA8Q96JA3 519 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 CACNG6Q9BXT2 260 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 SLC25A19Q9HC21 320 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 S100A14Q9HCY8 104 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 PLEK2Q9NYT0 353 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 ENOPH1Q9UHY7 261 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 KCNG2Q9UJ96 466 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 OTOGQ6ZRI0 2925 aa16.39■□□□□ 0.21
PDLIM7-204ENST00000393546 GPRIN2O60269 458 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 DOK2O60496 412 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 MITFO75030 526 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 FAM157BP0CG42 384 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 SPI1P17947 270 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 FMO3P31513 532 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 HTR5AP47898 357 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 BLVRAP53004 296 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 SNRPD2P62316 118 aaKnown RBP16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 EFNB3Q15768 340 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 ZSCAN26Q16670 478 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 TMEM236Q5W0B7 351 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 ARL9Q6T311 187 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 VASH1Q7L8A9 365 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 OR51L1Q8NGJ5 315 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 OR2AJ1Q8NGZ0 328 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 ZNRF4Q8WWF5 429 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 OSBPL10Q9BXB5 764 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 BCL2L14Q9BZR8 327 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 PLK3Q9H4B4 646 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 FBXO9Q9UK97 447 aaPredicted RBP16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 LHFPL6Q9Y693 200 aa16.38■□□□□ 0.21
PDLIM7-204ENST00000393546 FAM183AA6NL82 134 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 PRR23D1E9PI22 279 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 RER1O15258 196 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 SURF4O15260 269 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 GYPBP06028 91 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 LCKP06239 509 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 PRR23D2P0DMB1 279 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 IGFBP5P24593 272 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 EVX1P49640 407 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 HIST1H3AP68431 136 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 PTGES3Q15185 160 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 RAB35Q15286 201 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 CCDC92Q53HC0 331 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 HIST2H3PS2Q5TEC6 136 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 RGS7BPQ6MZT1 257 aaPredicted RBP16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 PRSS57Q6UWY2 283 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 HIST2H3AQ71DI3 136 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 OR1F12Q8NHA8 337 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 PTP4A1Q93096 173 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 MRPL24Q96A35 216 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 RBM4BQ9BQ04 359 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 OR51B6Q9H340 312 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 MED20Q9H944 212 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 ELOVL3Q9HB03 270 aa16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 MRPL22Q9NWU5 206 aaKnown RBP16.37■□□□□ 0.21
PDLIM7-204ENST00000393546 TVP23AA6NH52 213 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 CLUP10909 449 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 SELENOVP59797 346 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 ADAM8P78325 824 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 SNAPC1Q16533 368 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 Q5PR19 223 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 SLC18B1Q6NT16 456 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 CORO6Q6QEF8 472 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 LINC00346Q8IVM7 164 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 C1orf174Q8IYL3 243 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 OR6K6Q8NGW6 343 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 STMN2Q93045 179 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 C4orf45Q96LM5 186 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 PRRG3Q9BZD7 231 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 OR51V1Q9H2C8 321 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 BARX1Q9HBU1 254 aaPredicted RBP16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 TVP23BQ9NYZ1 205 aa16.36■□□□□ 0.21
PDLIM7-204ENST00000393546 CYB5R1Q9UHQ9 305 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms