RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 TAS2R41P59536 307 aa17.11■□□□□ 0.33
CCDC50-202ENST00000392456 RPS27AP62979 156 aaKnown RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 UBA52P62987 128 aaKnown RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 SPIN1Q9Y657 262 aaPredicted RBP17.11■□□□□ 0.33
CCDC50-202ENST00000392456 C2orf92A0A1B0GVN3 265 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 OR10H3O60404 316 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 PMELP40967 661 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 HCCSP53701 268 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 FABP5Q01469 135 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 DHRS13Q6UX07 377 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 TOMM5Q8N4H5 51 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 APCDD1LQ8NCL9 501 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 MORN4Q8NDC4 146 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 OR5M3Q8NGP4 307 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 BSCL2Q96G97 398 aaPredicted RBP17.1■□□□□ 0.33
CCDC50-202ENST00000392456 GVINP1Q7Z2Y8 2422 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 A0A087WUU8 490 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.1■□□□□ 0.33
CCDC50-202ENST00000392456 TMEM72A0PK05 275 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 TSTD3H0UI37 97 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 DRD5P21918 477 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 PSMA6P60900 246 aaKnown RBP17.1■□□□□ 0.33
CCDC50-202ENST00000392456 INPP5JQ15735 1006 aaPredicted RBP17.1■□□□□ 0.33
CCDC50-202ENST00000392456 ISXQ2M1V0 245 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 DNLZQ5SXM8 178 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 MTFR2Q6P444 385 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 APOOLQ6UXV4 268 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 NFAM1Q8NET5 270 aaPredicted RBP17.1■□□□□ 0.33
CCDC50-202ENST00000392456 MR1Q95460 341 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 C14orf79Q96F83 325 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 SMCO4Q9NRQ5 59 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 FBXL3Q9UKT7 428 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 KCNIP3Q9Y2W7 256 aa17.1■□□□□ 0.33
CCDC50-202ENST00000392456 HEATR5AQ86XA9 2040 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 MCIDASD6RGH6 385 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 LDLRAD4O15165 306 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 CPN1P15169 458 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 PITPNBP48739 271 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 PGBD2Q6P3X8 592 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 OR4K5Q8NGD3 323 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 OR1S2Q8NGQ3 325 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 THAP3Q8WTV1 239 aaPredicted RBP17.09■□□□□ 0.33
CCDC50-202ENST00000392456 R3HDM4Q96D70 268 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 ADOQ96SZ5 270 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 SUCNR1Q9BXA5 334 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 SEC11CQ9BY50 192 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 CHST5Q9GZS9 411 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 WWTR1Q9GZV5 400 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 SLC26A1Q9H2B4 701 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 KLHL9Q9P2J3 617 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 FXYD6-FXYD2A0A087WZ82 144 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 C17orf51A8MQB3 221 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 ZNF354AO60765 605 aaPredicted RBP17.09■□□□□ 0.33
CCDC50-202ENST00000392456 CD2P06729 351 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 RBMS1P29558 406 aaKnown RBP17.09■□□□□ 0.33
CCDC50-202ENST00000392456 CRISP1P54107 249 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 LSM6P62312 80 aaKnown RBP17.09■□□□□ 0.33
CCDC50-202ENST00000392456 CXADRP78310 365 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 CLEC9AQ6UXN8 241 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 GDF7Q7Z4P5 450 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 LRRC28Q86X40 367 aaPredicted RBP17.09■□□□□ 0.33
CCDC50-202ENST00000392456 GATSQ8NAP1 163 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 ABHD1Q96SE0 405 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 TEAD3Q99594 435 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 RTN4RQ9BZR6 473 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 FXYD6Q9H0Q3 95 aa17.09■□□□□ 0.33
CCDC50-202ENST00000392456 CACYBPQ9HB71 228 aaKnown RBP17.09■□□□□ 0.33
CCDC50-202ENST00000392456 A0A1B0GUH1 482 aa17.08■□□□□ 0.33
CCDC50-202ENST00000392456 SHISA3A0PJX4 238 aa17.08■□□□□ 0.33
CCDC50-202ENST00000392456 PNLIPRP2P54317 469 aa17.08■□□□□ 0.33
CCDC50-202ENST00000392456 ZNF141Q15928 474 aa17.08■□□□□ 0.33
CCDC50-202ENST00000392456 CSRP2Q16527 193 aa17.08■□□□□ 0.33
CCDC50-202ENST00000392456 CD200R1LQ6Q8B3 271 aa17.08■□□□□ 0.33
CCDC50-202ENST00000392456 IL4I1Q96RQ9 567 aa17.08■□□□□ 0.33
CCDC50-202ENST00000392456 G6PC3Q9BUM1 346 aa17.08■□□□□ 0.33
CCDC50-202ENST00000392456 DNAJB12Q9NXW2 375 aaKnown RBP17.08■□□□□ 0.33
CCDC50-202ENST00000392456 IFITM10A6NMD0 228 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 B4E171 279 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 OR2T1O43869 369 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 PRKYO43930 277 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 KLF7O75840 302 aaPredicted RBP17.08■□□□□ 0.32
CCDC50-202ENST00000392456 SLC2A1P11166 492 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 MMP11P24347 488 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 PPIAP62937 165 aaKnown RBP17.08■□□□□ 0.32
CCDC50-202ENST00000392456 SURF2Q15527 256 aaPredicted RBP17.08■□□□□ 0.32
CCDC50-202ENST00000392456 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.08■□□□□ 0.32
CCDC50-202ENST00000392456 EIPR1Q53HC9 387 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 NHLRC1Q6VVB1 395 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 WDR88Q6ZMY6 472 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 ZNF248Q8NDW4 579 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 ACOT12Q8WYK0 555 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 SLC41A3Q96GZ6 507 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 KLHDC3Q9BQ90 382 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 LRFN3Q9BTN0 628 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 FAM212BQ9NTI7 297 aaPredicted RBP17.08■□□□□ 0.32
CCDC50-202ENST00000392456 COPS7AQ9UBW8 275 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 SLC7A7Q9UM01 511 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 FLVCR2Q9UPI3 526 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 GOLT1BQ9Y3E0 138 aa17.08■□□□□ 0.32
CCDC50-202ENST00000392456 FAAHO00519 579 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms