RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 POMT2Q9UKY4 750 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 EXO1Q9UQ84 846 aaKnown RBP15.59■□□□□ 0.09
SGCB-201ENST00000381431 PRSS37A4D1T9 235 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 ALOX5APP20292 161 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 ACHEP22303 614 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 WDR34Q96EX3 536 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 PFDN5Q99471 154 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 CHST11Q9NPF2 352 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 EMC3Q9P0I2 261 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 MCRIP1C9JLW8 97 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 SNAPINO95295 136 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 CHRM2P08172 466 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 FAM109BQ6ICB4 259 aaPredicted RBP15.59■□□□□ 0.09
SGCB-201ENST00000381431 RTL6Q6ICC9 239 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 TMUB2Q71RG4 321 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 YRDCQ86U90 279 aaKnown RBP15.59■□□□□ 0.09
SGCB-201ENST00000381431 OR2L13Q8N349 312 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 LIPHQ8WWY8 451 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 OR2A5Q96R48 311 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 LAT2Q9GZY6 243 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 PIGLQ9Y2B2 252 aa15.59■□□□□ 0.09
SGCB-201ENST00000381431 PIGBOS1A0A0B4J2F0 54 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 A0A0U1RQK1 487 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 CXorf51AA0A1B0GTR3 108 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 FFAR1O14842 300 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 APOBEC1P41238 236 aaKnown RBP15.58■□□□□ 0.09
SGCB-201ENST00000381431 DCAF12Q5T6F0 453 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 MDGA2Q7Z553 956 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 ZNF680Q8NEM1 530 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 PXT1Q8NFP0 134 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.58■□□□□ 0.09
SGCB-201ENST00000381431 SLC19A3Q9BZV2 496 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 NELFAQ9H3P2 528 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 CYSLTR2Q9NS75 346 aa15.58■□□□□ 0.09
SGCB-201ENST00000381431 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.58■□□□□ 0.08
SGCB-201ENST00000381431 WISP3O95389 354 aaPredicted RBP15.58■□□□□ 0.08
SGCB-201ENST00000381431 ICAM2P13598 275 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 FGF9P31371 208 aaPredicted RBP15.58■□□□□ 0.08
SGCB-201ENST00000381431 RPL23AP62750 156 aaKnown RBP15.58■□□□□ 0.08
SGCB-201ENST00000381431 ZNF674Q2M3X9 581 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 GRAMD2AQ8IUY3 354 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 PELI1Q96FA3 418 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 NMNAT2Q9BZQ4 307 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 ACTL6BO94805 426 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 CER1O95813 267 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 ENPP1P22413 925 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 FAM213BQ8TBF2 198 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 KTI12Q96EK9 354 aaPredicted RBP15.58■□□□□ 0.08
SGCB-201ENST00000381431 ARPC5LQ9BPX5 153 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 C1orf123Q9NWV4 160 aa15.58■□□□□ 0.08
SGCB-201ENST00000381431 PUS1Q9Y606 427 aaKnown RBP eCLIP15.58■□□□□ 0.08
SGCB-201ENST00000381431 ZNF780AO75290 641 aaPredicted RBP15.57■□□□□ 0.08
SGCB-201ENST00000381431 ZNF728P0DKX0 622 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 TMPRSS11FQ6ZWK6 438 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 SUMF2Q8NBJ7 301 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 OR4D11Q8NGI4 311 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 ERVMER34-1Q9H9K5 563 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 SLC22A11Q9NSA0 550 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 H0YIG0 161 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 DOC2BQ14184 412 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 SLC17A1Q14916 467 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 GPNMBQ14956 572 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 PEA15Q15121 130 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 PGAP1Q75T13 922 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 FJX1Q86VR8 437 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 RELL2Q8NC24 303 aaPredicted RBP15.57■□□□□ 0.08
SGCB-201ENST00000381431 OR52B4Q8NGK2 314 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 OR14K1Q8NGZ2 314 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 ZNF681Q96N22 645 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 ABHD6Q9BV23 337 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 GPR84Q9NQS5 396 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 TMEM221A6NGB7 291 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 PPP1CAP62136 330 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 OR1M1Q8NGA1 313 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 KCND3Q9UK17 655 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 NXT1Q9UKK6 140 aaKnown RBP15.57■□□□□ 0.08
SGCB-201ENST00000381431 TP53TG5Q9Y2B4 290 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 A0A087WUJ7 227 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 E9PI62 339 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 PHF1O43189 567 aaPredicted RBP15.57■□□□□ 0.08
SGCB-201ENST00000381431 ATG12O94817 140 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 GIPP09681 153 aaPredicted RBP15.57■□□□□ 0.08
SGCB-201ENST00000381431 EMC4Q5J8M3 183 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 C17orf47Q8NEP4 570 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 SGK3Q96BR1 496 aa15.57■□□□□ 0.08
SGCB-201ENST00000381431 TRIM64A6NGJ6 449 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 TBX19O60806 448 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 GUCA2AQ02747 115 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 TCTN1Q2MV58 587 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 TMEM217Q8N7C4 229 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 NT5CQ8TCD5 201 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 ABHD5Q8WTS1 349 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 SMIM4Q8WVI0 70 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 PIGQQ9BRB3 760 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 CNTNAP3Q9BZ76 1288 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 TXNIPQ9H3M7 391 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 GPR173Q9NS66 373 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 SH3BGRL2Q9UJC5 107 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 TRAPPC2LQ9UL33 140 aa15.56■□□□□ 0.08
SGCB-201ENST00000381431 COL24A1Q17RW2 1714 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms