RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 TMPRSS5Q9H3S3 457 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 TMEM59LQ9UK28 342 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 TMEM212A6NML5 194 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 HSD17B1P14061 328 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 OR2AK2Q8NG84 335 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 ZNF764Q96H86 408 aaPredicted RBP11.39□□□□□ -0.59
CHD3-203ENST00000380358 ABCA9Q8IUA7 1624 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 RAB7AP51149 207 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 ADAM5Q6NVV9 412 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 RBM12BQ8IXT5 1001 aaKnown RBP11.39□□□□□ -0.59
CHD3-203ENST00000380358 LILRA3Q8N6C8 439 aaPredicted RBP11.39□□□□□ -0.59
CHD3-203ENST00000380358 SMOC1Q9H4F8 434 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 C6orf106Q9H6K1 298 aaPredicted RBP11.39□□□□□ -0.59
CHD3-203ENST00000380358 SLA2Q9H6Q3 261 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 KIF1AQ12756 1690 aa11.39□□□□□ -0.59
CHD3-203ENST00000380358 TBXA2RP21731 343 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 CD300LGQ6UXG3 332 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 LACC1Q8IV20 430 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 KCNRGQ8N5I3 272 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.38□□□□□ -0.59
CHD3-203ENST00000380358 MFSD9Q8NBP5 474 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 DEFB124Q8NES8 71 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 MAFAQ8NHW3 353 aaPredicted RBP11.38□□□□□ -0.59
CHD3-203ENST00000380358 ABHD14AQ9BUJ0 271 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 MKRN2Q9H000 416 aaKnown RBP11.38□□□□□ -0.59
CHD3-203ENST00000380358 SLAMF8Q9P0V8 285 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 MS4A2Q01362 244 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 FABP9Q0Z7S8 132 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 TCTN1Q2MV58 587 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 TOR2AQ5JU69 321 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 RPS19BP1Q86WX3 136 aaKnown RBP11.38□□□□□ -0.59
CHD3-203ENST00000380358 PLPP6Q8IY26 295 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 PDXPQ96GD0 296 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 KLF16Q9BXK1 252 aaPredicted RBP11.38□□□□□ -0.59
CHD3-203ENST00000380358 OR2C1O95371 312 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 OPRD1P41143 372 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 MRPS21P82921 87 aaKnown RBP11.38□□□□□ -0.59
CHD3-203ENST00000380358 COX20Q5RI15 118 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 AMIGO3Q86WK7 504 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 PRSS16Q9NQE7 514 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 H3BP45 60 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 ALOX5APP20292 161 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 MAP2K6P52564 334 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 DGAT2L7PQ6IED9 249 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 SLC22A24Q8N4F4 322 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 CNTD2Q9H8S5 307 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 LOXL2Q9Y4K0 774 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 SHISA8B8ZZ34 492 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 ADRA1AP35348 466 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 RPS27P42677 84 aaKnown RBP11.38□□□□□ -0.59
CHD3-203ENST00000380358 DBPQ10586 325 aaPredicted RBP11.38□□□□□ -0.59
CHD3-203ENST00000380358 AGERQ15109 404 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 RBMS2Q15434 407 aaKnown RBP11.38□□□□□ -0.59
CHD3-203ENST00000380358 GJC3Q8NFK1 279 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 ZNF2Q9BSG1 426 aaPredicted RBP11.38□□□□□ -0.59
CHD3-203ENST00000380358 TMEM9BQ9NQ34 198 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 OR2W5A6NFC9 320 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 OR5H8P0DN80 308 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 UBE2MP61081 183 aaKnown RBP11.38□□□□□ -0.59
CHD3-203ENST00000380358 SLC35E4Q6ICL7 350 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 STEAP1BQ6NZ63 245 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 SLC35A4Q96G79 324 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 OR51I2Q9H344 312 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 TXNIPQ9H3M7 391 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 RAB18Q9NP72 206 aa11.38□□□□□ -0.59
CHD3-203ENST00000380358 GYPAP02724 150 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 NAGAP17050 411 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 PMCHP20382 165 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 GPM6AP51674 278 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 ETFRF1Q6IPR1 90 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 C17orf78Q8N4C9 275 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 ZNF740Q8NDX6 193 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 ZNF486Q96H40 463 aaPredicted RBP11.37□□□□□ -0.59
CHD3-203ENST00000380358 GLAP06280 429 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 C7P10643 843 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 ADRA2CP18825 462 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 CNR1P21554 472 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 HAAOP46952 286 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 MDGA2Q7Z553 956 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 C1orf87Q8N0U7 546 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 PARP16Q8N5Y8 322 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 OR2AE1Q8NHA4 323 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 GAR1Q9NY12 217 aaKnown RBP11.37□□□□□ -0.59
CHD3-203ENST00000380358 R4GN57 208 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 G3V3Q6 166 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 CTDSP2O14595 271 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 TNFSF8P32971 234 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 OR3A4PP47883 348 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 DLX5P56178 289 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 ZNF260Q3ZCT1 412 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 MKS1Q9NXB0 559 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 ICAM5Q9UMF0 924 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 IGKV6D-41A0A0C4DH26 115 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 SPRY1O43609 319 aaPredicted RBP11.37□□□□□ -0.59
CHD3-203ENST00000380358 FGF7P21781 194 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 SHHQ15465 462 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 PROX2Q3B8N5 592 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 SPATS1Q496A3 300 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 DHRS11Q6UWP2 260 aa11.37□□□□□ -0.59
CHD3-203ENST00000380358 LGI3Q8N145 548 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms