RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 H3BSA7 217 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 PIP5K1CO60331 668 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 IDH3AP50213 366 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 RAG2P55895 527 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 MAGOHP61326 146 aaKnown RBP14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 GNB2P62879 340 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 DEFB112Q30KQ8 113 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 FAM27BQ5VT28 67 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 ARL9Q6T311 187 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 FIP1L1Q6UN15 594 aaKnown RBP14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 DLEU7Q6UYE1 221 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 MUC20Q8N307 709 aaPredicted RBP14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 ZNF420Q8TAQ5 688 aaPredicted RBP14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 NMD3Q96D46 503 aaKnown RBP14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 CMBLQ96DG6 245 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 THOC1Q96FV9 657 aaKnown RBP14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 SMURF2Q9HAU4 748 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 LRCH1Q9Y2L9 728 aa14.91□□□□□ -0.02
PDLIM4-202ENST00000379018 CYB5R3P00387 301 aaPredicted RBP14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 CST2P09228 141 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 THRBP10828 461 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 NR2C1P13056 603 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 HTR5AP47898 357 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 MRPL19P49406 292 aaKnown RBP14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 ERFP50548 548 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 MMP16P51512 607 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 PCBD1P61457 104 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 LRRN1Q6UXK5 716 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 PATL1Q86TB9 770 aaKnown RBP14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 C1QL4Q86Z23 238 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 C1orf174Q8IYL3 243 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 ATG16L2Q8NAA4 619 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 OR10AD1Q8NGE0 317 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 OR10S1Q8NGN2 331 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 RBP7Q96R05 134 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 VIPAS39Q9H9C1 493 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 BEX1Q9HBH7 125 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 EMC7Q9NPA0 242 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 MAN2C1Q9NTJ4 1040 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 IL20RAQ9UHF4 553 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 SH3GLB1Q9Y371 365 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 GMEB1Q9Y692 573 aa14.9□□□□□ -0.02
PDLIM4-202ENST00000379018 IGHV2-70DA0A0C4DH43 119 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 GMNCA6NCL1 334 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 TMEM178BH3BS89 294 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 H7C1C5 153 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 SURF4O15260 269 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 DOK2O60496 412 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 PLATP00750 562 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 LCN6P62502 163 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 ENDOGQ14249 297 aaKnown RBP14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 ALG10Q5BKT4 473 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 BEND6Q5SZJ8 279 aaPredicted RBP14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 RUSC1-AS1Q66K80 236 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 C9orf139Q6ZV77 190 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 CROCCP2Q86T23 111 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 KLBQ86Z14 1044 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 MICU2Q8IYU8 434 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 NPEPL1Q8NDH3 523 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 OR4F5Q8NH21 305 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 TMEM239Q8WW34 195 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 UBE2FQ969M7 185 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 UPRTQ96BW1 309 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 TXNIPQ9H3M7 391 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 IL19Q9UHD0 177 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 NDRG4Q9ULP0 352 aaKnown RBP14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 MMP24Q9Y5R2 645 aa14.89□□□□□ -0.03
PDLIM4-202ENST00000379018 M0QZ24 198 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 WNT2P09544 360 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 MSR1P21757 451 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 OTPQ5XKR4 325 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 OLFML2AQ68BL7 652 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 SLC30A8Q8IWU4 369 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 POU5F2Q8N7G0 328 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 OR10A6Q8NH74 314 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 RAB40AQ8WXH6 277 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 SLC7A6Q92536 515 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 CGREF1Q99674 301 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 ALG12Q9BV10 488 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 PCDHAC1Q9H158 963 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 MMP27Q9H306 513 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 GCM1Q9NP62 436 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 STARD10Q9Y365 291 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 MED31Q9Y3C7 131 aa14.88□□□□□ -0.03
PDLIM4-202ENST00000379018 C12orf71A8MTZ7 269 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 SRRM5B3KS81 715 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 SCG5P05408 212 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 CTXN1P60606 82 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 RPL27P61353 136 aaKnown RBP14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 PAX2Q02962 417 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 PIN1Q13526 163 aaPredicted RBP14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 NFYCQ13952 458 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 FAM201AQ5SY85 155 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 SLC27A4Q6P1M0 643 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 NUDT16L1Q9BRJ7 211 aaKnown RBP14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 CCDC28BQ9BUN5 200 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 CHIAQ9BZP6 476 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 C1RLQ9NZP8 487 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 RIMS3Q9UJD0 308 aa14.87□□□□□ -0.03
PDLIM4-202ENST00000379018 A0A1B0GUS0 222 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms