RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 STK35Q8TDR2 534 aa22.69■■□□□ 1.22
C9orf40-201ENST00000376854 TMEM82A0PJX8 343 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 SRSF10O75494 262 aaKnown RBP22.68■■□□□ 1.22
C9orf40-201ENST00000376854 ZP3P21754 424 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 SORDQ00796 357 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 SPOCK1Q08629 439 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 GK2Q14410 553 aaPredicted RBP22.68■■□□□ 1.22
C9orf40-201ENST00000376854 C14orf28Q4W4Y0 310 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 ADGRE4PQ86SQ3 457 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 JAGN1Q8N5M9 183 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 CMKLR1Q99788 373 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 SCPEP1Q9HB40 452 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 MED9Q9NWA0 146 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 MYEF2Q9P2K5 600 aaKnown RBP22.68■■□□□ 1.22
C9orf40-201ENST00000376854 MKL2Q9ULH7 1088 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 H3BUI4 141 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 OR2T1O43869 369 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 PMS2P2O95744 297 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 OR4E1P0C645 316 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 IL11P20809 199 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 C1orf189Q5VU69 101 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 LRFN4Q6PJG9 635 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 TMED4Q7Z7H5 227 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 ZNF441Q8N8Z8 693 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 SPERTQ8NA61 448 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 LINC00052Q96N35 136 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 TINAGL1Q9GZM7 467 aaPredicted RBP22.68■■□□□ 1.22
C9orf40-201ENST00000376854 SESN1Q9Y6P5 492 aa22.68■■□□□ 1.22
C9orf40-201ENST00000376854 LOC107986453A0A1B0GWG9 222 aa22.67■■□□□ 1.22
C9orf40-201ENST00000376854 AMY2AP04746 511 aa22.67■■□□□ 1.22
C9orf40-201ENST00000376854 CALCRP30988 508 aa22.67■■□□□ 1.22
C9orf40-201ENST00000376854 OR1D5P58170 312 aa22.67■■□□□ 1.22
C9orf40-201ENST00000376854 PRSS42Q7Z5A4 293 aa22.67■■□□□ 1.22
C9orf40-201ENST00000376854 ZNF248Q8NDW4 579 aa22.67■■□□□ 1.22
C9orf40-201ENST00000376854 ASB13Q8WXK3 278 aa22.67■■□□□ 1.22
C9orf40-201ENST00000376854 SLC25A21Q9BQT8 299 aaPredicted RBP22.67■■□□□ 1.22
C9orf40-201ENST00000376854 VN1R1Q9GZP7 353 aa22.67■■□□□ 1.22
C9orf40-201ENST00000376854 ZMAT3Q9HA38 289 aaKnown RBP22.67■■□□□ 1.22
C9orf40-201ENST00000376854 SEC16AO15027 2179 aa22.67■■□□□ 1.22
C9orf40-201ENST00000376854 MEGF11A6BM72 1044 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 METTL12A8MUP2 240 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 CD37P11049 281 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 ZNF823P16415 610 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 PMPCAQ10713 525 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 SQSTM1Q13501 440 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 CDH26Q8IXH8 852 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 TTYH1Q9H313 450 aaPredicted RBP22.66■■□□□ 1.22
C9orf40-201ENST00000376854 SDK1Q7Z5N4 2213 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 LMO7DNF2Z398 122 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 ZNF217O75362 1048 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 DCXRQ7Z4W1 244 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 C12orf45Q8N5I9 185 aaPredicted RBP22.66■■□□□ 1.22
C9orf40-201ENST00000376854 MFFQ9GZY8 342 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 SLCO5A1Q9H2Y9 848 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 G6PC2Q9NQR9 355 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 PFDN2Q9UHV9 154 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 OR52A1Q9UKL2 312 aa22.66■■□□□ 1.22
C9orf40-201ENST00000376854 CYB5AP00167 134 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 ARRB1P49407 418 aaPredicted RBP22.65■■□□□ 1.22
C9orf40-201ENST00000376854 FMODQ06828 376 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 BAMBIQ13145 260 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 OR10K2Q6IF99 312 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 OGFOD3Q6PK18 319 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 LINC00346Q8IVM7 164 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 SLC26A10Q8NG04 563 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 ASXL3Q9C0F0 2248 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 ABCA7Q8IZY2 2146 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 OR6C76A6NM76 312 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 FTCDNL1E5RQL4 147 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 LDLRAD4O15165 306 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 SRFP11831 508 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 FOLR1P15328 257 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 RPA2P15927 270 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 ACHEP22303 614 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 MOGAT2Q3SYC2 334 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 LANCL3Q6ZV70 420 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 PPA2Q9H2U2 334 aa22.65■■□□□ 1.22
C9orf40-201ENST00000376854 ZNF736B4DX44 427 aaPredicted RBP22.64■■□□□ 1.22
C9orf40-201ENST00000376854 ALOX12BO75342 701 aa22.64■■□□□ 1.22
C9orf40-201ENST00000376854 C5orf46Q6UWT4 87 aa22.64■■□□□ 1.22
C9orf40-201ENST00000376854 DPYSL5Q9BPU6 564 aa22.64■■□□□ 1.22
C9orf40-201ENST00000376854 A6NIZ1 184 aa22.64■■□□□ 1.21
C9orf40-201ENST00000376854 RFPL4AA6NLU0 287 aa22.64■■□□□ 1.21
C9orf40-201ENST00000376854 RFPL4AL1F8VTS6 287 aa22.64■■□□□ 1.21
C9orf40-201ENST00000376854 LMX1BO60663 402 aa22.64■■□□□ 1.21
C9orf40-201ENST00000376854 ISG15P05161 165 aa22.64■■□□□ 1.21
C9orf40-201ENST00000376854 PTGS2P35354 604 aa22.64■■□□□ 1.21
C9orf40-201ENST00000376854 NUP62P37198 522 aaPredicted RBP22.64■■□□□ 1.21
C9orf40-201ENST00000376854 RAP1BP61224 184 aa22.64■■□□□ 1.21
C9orf40-201ENST00000376854 RAP1AP62834 184 aa22.64■■□□□ 1.21
C9orf40-201ENST00000376854 NR0B2Q15466 257 aa22.64■■□□□ 1.21
C9orf40-201ENST00000376854 ZNF660Q6AZW8 331 aaPredicted RBP22.64■■□□□ 1.21
C9orf40-201ENST00000376854 FARSAQ9Y285 508 aaKnown RBP22.64■■□□□ 1.21
C9orf40-201ENST00000376854 A0A0A6YYH2 397 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 TMEM269A0A1B0GVZ9 245 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 A6NJ64 397 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 MS4A18H0YCH9 400 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 ZNF735P0CB33 412 aa22.63■■□□□ 1.21
C9orf40-201ENST00000376854 HNRNPKP61978 463 aaKnown RBP eCLIP22.63■■□□□ 1.21
C9orf40-201ENST00000376854 MS4A18Q3C1V0 323 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms