RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	TMPRSS3	P57727	454 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	PAQR8	Q8TEZ7	354 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	ANKRD19P	Q9H560	264 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	GDF2	Q9UK05	429 aa	Predicted RBP	12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	RASD1	Q9Y272	281 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	MSR1	P21757	451 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	SLC35A2	P78381	396 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	IGLV3-21	P80748	117 aa	Predicted RBP	12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	ZNF404	Q494X3	552 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	GPR155	Q7Z3F1	870 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	BORCS8	Q96FH0	119 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	COX4I2	Q96KJ9	171 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	SIGLEC11	Q96RL6	698 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	SLC7A11	Q9UPY5	501 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	RBMXL2	O75526	392 aa	Known RBP	12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	RAB3B	P20337	219 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	CX3CR1	P49238	355 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	SLC36A2	Q495M3	483 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	KISS1R	Q969F8	398 aa	Predicted RBP	12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	PLPPR2	Q96GM1	343 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	BANF2	Q9H503	90 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	HHLA2	Q9UM44	414 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568	RHBDD3	Q9Y3P4	386 aa		12.06	□□□□□ -0.48
DDR1-225	ENST00000376568		K7EM74	188 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	EGR4	Q05215	589 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	PGAP1	Q75T13	922 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	TMED4	Q7Z7H5	227 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	OR5T2	Q8NGG2	359 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	NANOS1	Q8WY41	292 aa	Known RBP	12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	SRXN1	Q9BYN0	137 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	REV1	Q9UBZ9	1251 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	PRSS50	Q9UI38	385 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	CLDN16	Q9Y5I7	305 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	TRAV18	A0A075B6X5	111 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	OR6C65	A6NJZ3	312 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	CENPX	A8MT69	81 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568		H3BMQ9	156 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568		M0R135	149 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	GABRP	O00591	440 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	OR2T7	P0C7T2	308 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	GRK5	P34947	590 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	RAC3	P60763	192 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	SLC15A4	Q8N697	577 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	OR2T27	Q8NH04	317 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	ZNF799	Q96GE5	643 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	DHRS1	Q96LJ7	313 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	COG8	Q96MW5	612 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	FAM210A	Q96ND0	272 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	SLCO5A1	Q9H2Y9	848 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	ZNF442	Q9H7R0	627 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	SLC7A10	Q9NS82	523 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	SLC22A23	A1A5C7	686 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	CENPBD1	B2RD01	187 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	VAMP5	O95183	116 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	RAB40AL	P0C0E4	278 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	PIP	P12273	146 aa	Predicted RBP	12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	ZNF16	P17020	682 aa	Predicted RBP	12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	GABRA2	P47869	451 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	TNFSF10	P50591	281 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	SCRN3	Q0VDG4	424 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	STK35	Q8TDR2	534 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	TNFAIP8L1	Q8WVP5	186 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	ZNF837	Q96EG3	531 aa	Predicted RBP	12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	ZNF764	Q96H86	408 aa	Predicted RBP	12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	GPR84	Q9NQS5	396 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	ATP23	Q9Y6H3	246 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	ZNF292	O60281	2723 aa		12.05	□□□□□ -0.48
DDR1-225	ENST00000376568	ABCA12	Q86UK0	2595 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	TP53BP1	Q12888	1972 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	FAM221A	A4D161	298 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568		H0YJX3	145 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	TMIGD3	P0DMS9	266 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	FCGR2A	P12318	317 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	FAH	P16930	419 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	PCSK6	P29122	969 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	MTCP1	P56278	107 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	OR10A3	P58181	314 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	SSX6	Q7RTT6	188 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	GJC3	Q8NFK1	279 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	HOXB13	Q92826	284 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	MRPL39	Q9NYK5	338 aa	Known RBP	12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	PTTG3P	Q9NZH4	202 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	OR52A1	Q9UKL2	312 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	COPS3	Q9UNS2	423 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	HSPE1-MOB4	S4R3N1	261 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	IGLV3-12	A0A075B6K2	115 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	ZNF44	P15621	663 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	TGM1	P22735	817 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	CD82	P27701	267 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	ASCC1	Q8N9N2	400 aa	Known RBP	12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	GCDH	Q92947	438 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	MUL1	Q969V5	352 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	STUB1	Q9UNE7	303 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	USP9X	Q93008	2570 aa	Predicted RBP	12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	IGKV1D-42	A0A075B6H8	117 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	VSTM5	A8MXK1	200 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	DLGAP1	O14490	977 aa		12.04	□□□□□ -0.48
DDR1-225	ENST00000376568	DVL2	O14641	736 aa		12.04	□□□□□ -0.48

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