RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 THADAQ6YHU6 1953 aa13.06□□□□□ -0.32
MSH5-201ENST00000375703 NUP210LQ5VU65 1888 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 H3BMH7 237 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 H3BUI4 141 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 CYB5AP00167 134 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 HOXD4P09016 255 aaPredicted RBP13.05□□□□□ -0.32
MSH5-201ENST00000375703 HLA-DOBP13765 273 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 LBX1P52954 281 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 GALNT16Q8N428 558 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 OR1N1Q8NGS0 311 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 ASB13Q8WXK3 278 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 SLCO5A1Q9H2Y9 848 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 R4GMQ9 66 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 RFPL4AA6NLU0 287 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 RHPN2P1A8MT19 583 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 RFPL4AL1F8VTS6 287 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 OR2T1O43869 369 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 IGHMP01871 453 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 CD37P11049 281 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 FSTP19883 344 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 ZNF660Q6AZW8 331 aaPredicted RBP13.05□□□□□ -0.32
MSH5-201ENST00000375703 OR10K2Q6IF99 312 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 STK35Q8TDR2 534 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 ZNF304Q9HCX3 659 aa13.05□□□□□ -0.32
MSH5-201ENST00000375703 FARSAQ9Y285 508 aaKnown RBP13.05□□□□□ -0.32
MSH5-201ENST00000375703 ZNF736B4DX44 427 aaPredicted RBP13.04□□□□□ -0.32
MSH5-201ENST00000375703 FADS1O60427 444 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 RPA2P15927 270 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 FBLP22087 321 aaKnown RBP13.04□□□□□ -0.32
MSH5-201ENST00000375703 PMPCAQ10713 525 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 SQSTM1Q13501 440 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 RAB30Q15771 203 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 CLVS2Q5SYC1 327 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 ADGRE4PQ86SQ3 457 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 C17orf82Q86X59 251 aaPredicted RBP13.04□□□□□ -0.32
MSH5-201ENST00000375703 CDH26Q8IXH8 852 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 PDZD9Q8IXQ8 264 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 OR6K3Q8NGY3 331 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 FBXL2Q9UKC9 423 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 OR52A1Q9UKL2 312 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 LGALS8O00214 317 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 ALOX12BO75342 701 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 SRSF10O75494 262 aaKnown RBP13.04□□□□□ -0.32
MSH5-201ENST00000375703 AQP8O94778 261 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 SPDEFO95238 335 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 ARRB1P49407 418 aaPredicted RBP13.04□□□□□ -0.32
MSH5-201ENST00000375703 SLC26A5P58743 744 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 HSD11B2P80365 405 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 UBXN2BQ14CS0 331 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 MOGAT2Q3SYC2 334 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 DCXRQ7Z4W1 244 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 ZNF546Q86UE3 836 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 SLC51BQ86UW2 128 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 BPIFB2Q8N4F0 458 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 OR1L3Q8NH93 324 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 B3GNT4Q9C0J1 378 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 RAB33BQ9H082 229 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 MKL2Q9ULH7 1088 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 TMEM269A0A1B0GVZ9 245 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 C2CD4DB7Z1M9 353 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 KRBOX1C9JBD0 128 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 IL11P20809 199 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 SCGB2B2Q4G0G5 96 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 LY6G6FQ5SQ64 297 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 C1orf189Q5VU69 101 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 OR5M9Q8NGP3 310 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 DMRTA2Q96SC8 542 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 G6PC2Q9NQR9 355 aa13.04□□□□□ -0.32
MSH5-201ENST00000375703 A0A0A6YYH2 397 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 IGHV1OR15-9A0A0B4J2B8 117 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 LOC107986453A0A1B0GWG9 222 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 A6NJ64 397 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 A8MXK9 166 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 MS4A18H0YCH9 400 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 TEX46H3BTG2 121 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 LDLRAD4O15165 306 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 SDC3O75056 442 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 ISG15P05161 165 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 ZNF735P0CB33 412 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 ZNF28P17035 718 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 OR1D5P58170 312 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 NR0B2Q15466 257 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 MS4A18Q3C1V0 323 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 ZNF704Q6ZNC4 412 aaPredicted RBP13.03□□□□□ -0.32
MSH5-201ENST00000375703 LINC00346Q8IVM7 164 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 BEST3Q8N1M1 668 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 STEAP2Q8NFT2 490 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 DPYSL5Q9BPU6 564 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 ZNF230Q9UIE0 474 aaPredicted RBP13.03□□□□□ -0.32
MSH5-201ENST00000375703 TRAV14DV4A0A0A6YYC5 116 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 A0A1W2PR77 199 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 TMEM235A6NFC5 223 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 TSPAN4O14817 238 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 LMX1BO60663 402 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 GLULP15104 373 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 ACHEP22303 614 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 MPGP29372 298 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 PTGS2P35354 604 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 FMODQ06828 376 aa13.03□□□□□ -0.32
MSH5-201ENST00000375703 BTN1A1Q13410 526 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms