RNA–Protein interactions for RNA: ENST00000375299.7

UPF3A-202, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3A, Length 2,387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-202ENST00000375299 HPGDP15428 266 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 CENPAP49450 140 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 ADAM8P78325 824 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 MICBQ29980 383 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 RNASE10Q5GAN6 216 aaKnown RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 C10orf91Q5T1B1 145 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 ARHGEF39Q8N4T4 335 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 ZDHHC22Q8N966 263 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 OR5AP2Q8NGF4 316 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 STOML3Q8TAV4 291 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 SLC25A44Q96H78 314 aaPredicted RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 PHB2Q99623 299 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 SLC7A5P2Q9GIP4 190 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 CERS4Q9HA82 394 aa19.01■□□□□ 0.63
UPF3A-202ENST00000375299 MYEF2Q9P2K5 600 aaKnown RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 MRPS33Q9Y291 106 aaKnown RBP19.01■□□□□ 0.63
UPF3A-202ENST00000375299 XKRYO14609 159 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 PRKNO60260 465 aaPredicted RBP19■□□□□ 0.63
UPF3A-202ENST00000375299 SPARCP09486 303 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 SKP1P63208 163 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 CXADRP78310 365 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 FUT7Q11130 342 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 ERV3-1Q14264 604 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 PHF19Q5T6S3 580 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 MED25Q71SY5 747 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 CATSPERDQ86XM0 798 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 GTPBP8Q8N3Z3 284 aaPredicted RBP19■□□□□ 0.63
UPF3A-202ENST00000375299 PIK3IP1Q96FE7 263 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 FAM60AQ9NP50 221 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 UBQLN4Q9NRR5 601 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 CARHSP1Q9Y2V2 147 aaKnown RBP19■□□□□ 0.63
UPF3A-202ENST00000375299 ATG2AQ2TAZ0 1938 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 DCDC2BA2VCK2 349 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 FITM1A5D6W6 292 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 F8W036 122 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 ACTL6AO96019 429 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 AVPR2P30518 371 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 PPICP45877 212 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 BLOC1S1P78537 153 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 BTG2P78543 158 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 IL13RA1P78552 427 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 ROM1Q03395 351 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 SERTAD2Q14140 314 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 CDNFQ49AH0 187 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 OR10K2Q6IF99 312 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 NUP54Q7Z3B4 507 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 SPAG16Q8N0X2 631 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 ZNF615Q8N8J6 731 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 OR51A2Q8NGJ7 313 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 ZNF563Q8TA94 476 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 MRGPRFQ96AM1 343 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 NUDT9Q9BW91 350 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 ESRP2Q9H6T0 727 aaKnown RBP19■□□□□ 0.63
UPF3A-202ENST00000375299 MKL2Q9ULH7 1088 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 CLDN16Q9Y5I7 305 aa19■□□□□ 0.63
UPF3A-202ENST00000375299 FAM221BA6H8Z2 402 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 OR2W5A6NFC9 320 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 ZNF264O43296 627 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 OR6A2O95222 327 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 MPZP25189 248 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 RIDAP52758 137 aaKnown RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 DCDP81605 110 aaKnown RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 RHOUQ7L0Q8 258 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 JAGN1Q8N5M9 183 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 PAQR8Q8TEZ7 354 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 ASB12Q8WXK4 309 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 ARL11Q969Q4 196 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 FOXRED1Q96CU9 486 aaPredicted RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 BMFQ96LC9 184 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 USB1Q9BQ65 265 aaKnown RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 ZNF768Q9H5H4 540 aaKnown RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 TMED7Q9Y3B3 224 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 DOCK8Q8NF50 2099 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 LOC100509620A0A075B734 347 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 F8VVB4 439 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 F8VWA3 439 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 SCDO00767 359 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 NUDT21O43809 227 aaKnown RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 TPT1P13693 172 aaKnown RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 RFC3P40938 356 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 FAM109BQ6ICB4 259 aaPredicted RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 TMEM71Q6P5X7 295 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 KCTD18Q6PI47 426 aaPredicted RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 ZSCAN1Q8NBB4 408 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 ACBD4Q8NC06 268 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 LILRB1Q8NHL6 650 aaPredicted RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 AQP3Q92482 292 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 KLHDC3Q9BQ90 382 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 BIN3Q9NQY0 253 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 MRPL22Q9NWU5 206 aaKnown RBP18.99■□□□□ 0.63
UPF3A-202ENST00000375299 COA4Q9NYJ1 87 aa18.99■□□□□ 0.63
UPF3A-202ENST00000375299 MEGF11A6BM72 1044 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 C11orf98E9PRG8 122 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 ZNF208O43345 1280 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 CD79AP11912 226 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 ZNF528Q3MIS6 628 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 FJX1Q86VR8 437 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 PTX4Q96A99 478 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 C8orf44Q96CB5 159 aa18.98■□□□□ 0.63
UPF3A-202ENST00000375299 OR6C76A6NM76 312 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms