RNA–Protein interactions for RNA: ENST00000373548.7

HDAC1-201, Transcript of histone deacetylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-201ENST00000373548 ASB18Q6ZVZ8 466 aa17.4■□□□□ 0.38
HDAC1-201ENST00000373548 IZUMO1Q8IYV9 350 aa17.4■□□□□ 0.38
HDAC1-201ENST00000373548 ASB5Q8WWX0 329 aa17.4■□□□□ 0.38
HDAC1-201ENST00000373548 SLC39A7Q92504 469 aa17.4■□□□□ 0.38
HDAC1-201ENST00000373548 ZFP3Q96NJ6 502 aa17.4■□□□□ 0.38
HDAC1-201ENST00000373548 DHDHQ9UQ10 334 aa17.4■□□□□ 0.38
HDAC1-201ENST00000373548 CUL9Q8IWT3 2517 aa17.4■□□□□ 0.38
HDAC1-201ENST00000373548 TMEM269A0A1B0GVZ9 245 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 TNFSF11O14788 317 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 DOK2O60496 412 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 F10P00742 488 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 MMP15P51511 669 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 CSNK2A1P68400 391 aaPredicted RBP17.39■□□□□ 0.38
HDAC1-201ENST00000373548 PITPNAQ00169 270 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 CREB3L2Q70SY1 520 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.39■□□□□ 0.38
HDAC1-201ENST00000373548 DUSP18Q8NEJ0 188 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 ADAMTS17Q8TE56 1095 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 YIPF5Q969M3 257 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 C1orf198Q9H425 327 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 RNF121Q9H920 327 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 STMN3Q9NZ72 180 aa17.39■□□□□ 0.38
HDAC1-201ENST00000373548 ZNF318Q5VUA4 2279 aa17.39■□□□□ 0.37
HDAC1-201ENST00000373548 MEIOCA2RUB1 952 aa17.39■□□□□ 0.37
HDAC1-201ENST00000373548 EIF2B2P49770 351 aaKnown RBP17.39■□□□□ 0.37
HDAC1-201ENST00000373548 DGCR2P98153 550 aa17.39■□□□□ 0.37
HDAC1-201ENST00000373548 POU4F3Q15319 338 aa17.39■□□□□ 0.37
HDAC1-201ENST00000373548 TRIP6Q15654 476 aaKnown RBP17.39■□□□□ 0.37
HDAC1-201ENST00000373548 CFAP77Q6ZQR2 320 aa17.39■□□□□ 0.37
HDAC1-201ENST00000373548 OR14L1PQ8NHC6 308 aa17.39■□□□□ 0.37
HDAC1-201ENST00000373548 NAA11Q9BSU3 229 aaPredicted RBP17.39■□□□□ 0.37
HDAC1-201ENST00000373548 SRXN1Q9BYN0 137 aa17.39■□□□□ 0.37
HDAC1-201ENST00000373548 NPAP1Q9NZP6 1156 aa17.39■□□□□ 0.37
HDAC1-201ENST00000373548 GDF2Q9UK05 429 aaPredicted RBP17.39■□□□□ 0.37
HDAC1-201ENST00000373548 FAM240BA0A1B0GVZ2 78 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 TLX3O43711 291 aaPredicted RBP17.38■□□□□ 0.37
HDAC1-201ENST00000373548 VAMP5O95183 116 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 CSRP1P21291 193 aaKnown RBP17.38■□□□□ 0.37
HDAC1-201ENST00000373548 CLDN20P56880 219 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 GPR176Q14439 515 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 RNASE12Q5GAN4 147 aaKnown RBP17.38■□□□□ 0.37
HDAC1-201ENST00000373548 ZNF385AQ96PM9 386 aaKnown RBP17.38■□□□□ 0.37
HDAC1-201ENST00000373548 ABCG5Q9H222 651 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 FAM206AQ9NX38 181 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 NLKQ9UBE8 527 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 HHLA2Q9UM44 414 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 A0A0B4J293 547 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 LOC107986453A0A1B0GWG9 222 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 PINLYPA6NC86 204 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 GJE1A6NN92 205 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 ISG15P05161 165 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 CD3GP09693 182 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 ACHEP22303 614 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 MMP16P51512 607 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 AGFG1P52594 562 aaKnown RBP17.38■□□□□ 0.37
HDAC1-201ENST00000373548 KCNMB1Q16558 191 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 SLC36A2Q495M3 483 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 JMJD6Q6NYC1 403 aaPredicted RBP17.38■□□□□ 0.37
HDAC1-201ENST00000373548 PLET1Q6UQ28 207 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 OR9K2Q8NGE7 335 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 SYNPRQ8TBG9 265 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 GLTPQ9NZD2 209 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 IL17BQ9UHF5 180 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 POLR1DQ9Y2S0 133 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 ETV7Q9Y603 341 aa17.38■□□□□ 0.37
HDAC1-201ENST00000373548 CTDSPLO15194 276 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 ENPP1P22413 925 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 CFPP27918 469 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 BCL2L15Q5TBC7 163 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 HACD4Q5VWC8 232 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 ZNF704Q6ZNC4 412 aaPredicted RBP17.37■□□□□ 0.37
HDAC1-201ENST00000373548 PRSS45Q7RTY3 260 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 PIP4P1Q86T03 277 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 SERPINA12Q8IW75 414 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 OR2M2Q96R28 347 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 PARD6AQ9NPB6 346 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 LRFN1Q9P244 771 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 STEAP1Q9UHE8 339 aa17.37■□□□□ 0.37
HDAC1-201ENST00000373548 NPIPA2E9PIF3 369 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 NPIPA3F8WFD2 350 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 CD2P06729 351 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 DCTDP32321 178 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 CD96P40200 585 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 SRP9P49458 86 aaKnown RBP17.36■□□□□ 0.37
HDAC1-201ENST00000373548 DCAF10Q5QP82 559 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 SPINK14Q6IE38 97 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 GGNQ86UU5 652 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 KCNE4Q8WWG9 221 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 TMEM54Q969K7 222 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 FREM2Q5SZK8 3169 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.36■□□□□ 0.37
HDAC1-201ENST00000373548 SMAD9O15198 467 aaKnown RBP17.36■□□□□ 0.37
HDAC1-201ENST00000373548 GSTZ1O43708 216 aaPredicted RBP17.36■□□□□ 0.37
HDAC1-201ENST00000373548 IGFBP3P17936 291 aaPredicted RBP17.36■□□□□ 0.37
HDAC1-201ENST00000373548 FSTP19883 344 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 CNR1P21554 472 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 CSNK1A1P48729 337 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 FOXO1Q12778 655 aa17.36■□□□□ 0.37
HDAC1-201ENST00000373548 WIPI1Q5MNZ9 446 aaPredicted RBP17.36■□□□□ 0.37
HDAC1-201ENST00000373548 PHYHD1Q5SRE7 291 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms