RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 CASRP41180 1078 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 ADAM8P78325 824 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 INSM1Q01101 510 aaPredicted RBP14.73□□□□□ -0.05
SDC4-201ENST00000372733 PPP1R1AQ13522 171 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 SNTB1Q13884 538 aaKnown RBP14.73□□□□□ -0.05
SDC4-201ENST00000372733 ARMC6Q6NXE6 501 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 TMEM88Q6PEY1 159 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 ADOQ96SZ5 270 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 CST11Q9H112 138 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 PURGQ9UJV8 347 aaKnown RBP14.73□□□□□ -0.05
SDC4-201ENST00000372733 GMEB2Q9UKD1 530 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 TMEM184BQ9Y519 407 aaPredicted RBP14.73□□□□□ -0.05
SDC4-201ENST00000372733 LRP12Q9Y561 859 aa14.73□□□□□ -0.05
SDC4-201ENST00000372733 PRSS37A4D1T9 235 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 C17orf105B2RV13 164 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 SULT2B1O00204 365 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 ABCD4O14678 606 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 CD74P04233 296 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 CD2P06729 351 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 DCNP07585 359 aaKnown RBP14.72□□□□□ -0.05
SDC4-201ENST00000372733 SKP1P63208 163 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 ZNF117Q03924 483 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 ACKR1Q16570 336 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 SLC22A6Q4U2R8 563 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 LPCAT3Q6P1A2 487 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 ZNF584Q8IVC4 421 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 SLC22A18ASQ8N1D0 253 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 C8orf44Q96CB5 159 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 CMBLQ96DG6 245 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 MMABQ96EY8 250 aaPredicted RBP14.72□□□□□ -0.05
SDC4-201ENST00000372733 FAM117AQ9C073 453 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 IGFLR1Q9H665 355 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 F5H0A9 414 aaPredicted RBP14.72□□□□□ -0.05
SDC4-201ENST00000372733 HCRTR2O43614 444 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 IGFBP3P17936 291 aaPredicted RBP14.72□□□□□ -0.05
SDC4-201ENST00000372733 FLI1Q01543 452 aaPredicted RBP14.72□□□□□ -0.05
SDC4-201ENST00000372733 SRSF4Q08170 494 aaKnown RBP14.72□□□□□ -0.05
SDC4-201ENST00000372733 BIKQ13323 160 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 C1orf61Q13536 156 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 EIF2B1Q14232 305 aaKnown RBP14.72□□□□□ -0.05
SDC4-201ENST00000372733 UNQ6126/PRO20091Q6UXV3 157 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 ACOT7LQ6ZUV0 252 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 RHOUQ7L0Q8 258 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 CATSPERDQ86XM0 798 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 ASB17Q8WXJ9 295 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 MRGPRFQ96AM1 343 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 ADAT1Q9BUB4 502 aaKnown RBP14.72□□□□□ -0.05
SDC4-201ENST00000372733 ABHD6Q9BV23 337 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 PRODH2Q9UF12 536 aa14.72□□□□□ -0.05
SDC4-201ENST00000372733 IGLV1-36A0A0B4J1U3 117 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 ICOSLGO75144 302 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 IL33O95760 270 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 CA3P07451 260 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 ZBTB25P24278 435 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 AVPR2P30518 371 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 RIDAP52758 137 aaKnown RBP14.71□□□□□ -0.05
SDC4-201ENST00000372733 HHEXQ03014 270 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 CDNFQ49AH0 187 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 PAN3Q58A45 887 aaKnown RBP14.71□□□□□ -0.05
SDC4-201ENST00000372733 MARCH3Q86UD3 253 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 GVQW1Q8N7I0 195 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 OR13C3Q8NGS6 347 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 GPBAR1Q8TDU6 330 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 MRGPRX1Q96LB2 322 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 NUDT9Q9BW91 350 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 GAREM1Q9H706 876 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 MBD2Q9UBB5 411 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 TMED7Q9Y3B3 224 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 LRP4O75096 1905 aa14.71□□□□□ -0.05
SDC4-201ENST00000372733 WIPF3A6NGB9 483 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 DISC1C4P0D8 188 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 LDLRAD4O15165 306 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 ATG12O94817 140 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 MPZL1O95297 269 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 CXCR1P25024 350 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 DNASE1L1P49184 302 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 CXADRP78310 365 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 ELOCQ15369 112 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 VWA2Q5GFL6 755 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 OR52W1Q6IF63 320 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 LYG2Q86SG7 212 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 CASTOR1Q8WTX7 329 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 TSNAXQ99598 290 aaKnown RBP14.71□□□□□ -0.06
SDC4-201ENST00000372733 EMC9Q9Y3B6 208 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 ZNF175Q9Y473 711 aa14.71□□□□□ -0.06
SDC4-201ENST00000372733 LOC107986453A0A1B0GWG9 222 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 OR14I1A6ND48 311 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 SIGLEC6O43699 453 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 FSTP19883 344 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 ROM1Q03395 351 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 GUCA2BQ16661 112 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 RNASE10Q5GAN6 216 aaKnown RBP14.7□□□□□ -0.06
SDC4-201ENST00000372733 PUSL1Q8N0Z8 303 aaKnown RBP14.7□□□□□ -0.06
SDC4-201ENST00000372733 OR4D6Q8NGJ1 314 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 ZNF519Q8TB69 540 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 GAL3ST4Q96RP7 486 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 ZNF587Q96SQ5 575 aaPredicted RBP14.7□□□□□ -0.06
SDC4-201ENST00000372733 NRSN2Q9GZP1 204 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 ADAM19Q9H013 955 aa14.7□□□□□ -0.06
SDC4-201ENST00000372733 SLCO5A1Q9H2Y9 848 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms