RNA–Protein interactions for RNA: ENST00000370087.5

SSR4-204, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SSR4, Length 745 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-204ENST00000370087 SLC6A2P23975 617 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 LAP3P28838 519 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 PCBP3P57721 371 aaKnown RBP12.84□□□□□ -0.35
SSR4-204ENST00000370087 TAF11Q15544 211 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 FBLN7Q53RD9 439 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 SLC25A47Q6Q0C1 308 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 BTNL3Q6UXE8 466 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 PTOV1Q86YD1 416 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 PFN4Q8NHR9 129 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 ZNF607Q96SK3 696 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 CDADC1Q9BWV3 514 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 SLC19A3Q9BZV2 496 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 KCNN2Q9H2S1 579 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 GCM1Q9NP62 436 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 ANGPT4Q9Y264 503 aa12.84□□□□□ -0.35
SSR4-204ENST00000370087 A0A1W2PRG6 482 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 CENPBD1B2RD01 187 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 H0YL77 283 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 HIST1H2ABP04908 130 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 SCG5P05408 212 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 CRYBA1P05813 215 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 TNFRSF1AP19438 455 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 PROK1P58294 105 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 FGF12P61328 243 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 GNB2P62879 340 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 ENDOGQ14249 297 aaKnown RBP12.83□□□□□ -0.36
SSR4-204ENST00000370087 RUNDC3AQ59EK9 446 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 FAM201AQ5SY85 155 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 FAM27BQ5VT28 67 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 HIST3H2AQ7L7L0 130 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 MUC20Q8N307 709 aaPredicted RBP12.83□□□□□ -0.36
SSR4-204ENST00000370087 FITM2Q8N6M3 262 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 LINC01006Q8NI28 216 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 FAM110DQ8TAY7 271 aaPredicted RBP12.83□□□□□ -0.36
SSR4-204ENST00000370087 HIST1H2ACQ93077 130 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 CPPED1Q9BRF8 314 aaPredicted RBP12.83□□□□□ -0.36
SSR4-204ENST00000370087 TMEM246Q9BRR3 403 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 SIKE1Q9BRV8 207 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 NANOGQ9H9S0 305 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 TMEM165Q9HC07 324 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 RNF114Q9Y508 228 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 GMEB1Q9Y692 573 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 USH1CQ9Y6N9 552 aa12.83□□□□□ -0.36
SSR4-204ENST00000370087 IGHV3-64DA0A0J9YX35 117 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 KIR2DS1A0A191URI9 304 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 TRAPPC13A5PLN9 417 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 POLR3GO15318 223 aaPredicted RBP12.82□□□□□ -0.36
SSR4-204ENST00000370087 SERPINB7O75635 380 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 ALX3O95076 343 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 PRB2P02812 416 aaPredicted RBP12.82□□□□□ -0.36
SSR4-204ENST00000370087 SFTPBP07988 381 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 GPX2P18283 190 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 FUT1P19526 365 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 CD247P20963 164 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 KITLGP21583 273 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 TNFSF4P23510 183 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 DAP3P51398 398 aaKnown RBP12.82□□□□□ -0.36
SSR4-204ENST00000370087 ARHGDIAP52565 204 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 CD47Q08722 323 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 TAF9Q16594 264 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 UNQ6126/PRO20091Q6UXV3 157 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 OR10AD1Q8NGE0 317 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 C10orf82Q8WW14 230 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 CMBLQ96DG6 245 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 THOC1Q96FV9 657 aaKnown RBP12.82□□□□□ -0.36
SSR4-204ENST00000370087 NUDT16L1Q9BRJ7 211 aaKnown RBP12.82□□□□□ -0.36
SSR4-204ENST00000370087 EVA1AQ9H8M9 152 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 SMURF2Q9HAU4 748 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 INIPQ9NRY2 104 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 C20orf141Q9NUB4 165 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 IL19Q9UHD0 177 aa12.82□□□□□ -0.36
SSR4-204ENST00000370087 C22orf46C9J442 243 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 CLPXO76031 633 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 OR7A10O76100 309 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 ABHD16AO95870 558 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 CST2P09228 141 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 TSPAN19P0C672 248 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 TROVE2P10155 538 aaKnown RBP eCLIP12.81□□□□□ -0.36
SSR4-204ENST00000370087 HOXA4Q00056 320 aaPredicted RBP12.81□□□□□ -0.36
SSR4-204ENST00000370087 TOP3AQ13472 1001 aaPredicted RBP12.81□□□□□ -0.36
SSR4-204ENST00000370087 SELPLGQ14242 412 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 HLXQ14774 488 aaPredicted RBP12.81□□□□□ -0.36
SSR4-204ENST00000370087 SLC27A4Q6P1M0 643 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 FOXL2NBQ6ZUU3 175 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 NKAIN4Q8IVV8 208 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 C1orf174Q8IYL3 243 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 OR5AS1Q8N127 324 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 NEIL1Q96FI4 390 aaPredicted RBP12.81□□□□□ -0.36
SSR4-204ENST00000370087 ELOVL3Q9HB03 270 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 NOX4Q9NPH5 578 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 MAN2C1Q9NTJ4 1040 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.81□□□□□ -0.36
SSR4-204ENST00000370087 STARD10Q9Y365 291 aa12.81□□□□□ -0.36
SSR4-204ENST00000370087 G3V4G9 280 aa12.8□□□□□ -0.36
SSR4-204ENST00000370087 VIMP08670 466 aaKnown RBP12.8□□□□□ -0.36
SSR4-204ENST00000370087 GSTM3P21266 225 aa12.8□□□□□ -0.36
SSR4-204ENST00000370087 PPIBP23284 216 aaKnown RBP12.8□□□□□ -0.36
SSR4-204ENST00000370087 CRYBA2P53672 197 aa12.8□□□□□ -0.36
SSR4-204ENST00000370087 BEAN1Q3B7T3 259 aa12.8□□□□□ -0.36
SSR4-204ENST00000370087 FAM205BPQ63HN1 556 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms